result

Gene information

Detail information of g530150

Location

Gene	Chr	Start	End	Strand
g530150	CHR3	204728585	204734305	-

Sequences

CDS

>g530150.t1
ATGTACCTATCGCCGACGAACTTTTGGCTGGACATAAGAGCCTATATGGAGAGTCGACCACAAGATAATAATCAAGTAGAAGAGAGAACTTCAAAGGTAAACATATGGTCGAAGTTTCTACAAAGAAAAACAAAAAAAATCACTTCAGCCATGTTACTGAATTTTGTAATATCTATCCTGTTCCTAAAACTTGCTTCGTCTTCTAACACTACTAGTTTCATCTTCAACAAATTTAATCCCACTGACTTGACTCTGTACGGATTATCAGAGATCACAAACAGTGGCCTTCTCCAGCTCACAAACAACACAATTCTTCAATCCGGCCGTGCGTTTTATCCACACCCTATTCAATTCAAGCACAAATCCTTTCATACAACCTTCATCTTTGCAATAGTACCGGAATACCCCAATATAAGTAACCATGGCATGACCTTTCTAATCTCCTCAACTAAAGAGATTACAGGTACACCTGGTCCTTTCTTCGGGATCTTCAATGAGACAAATAAATTCAACTCGAGTAACCTGTTAGCAGTTGAGATGGACACTAGCAAGACGATAGGATTCAAAGACATCGATAACAATCATATTGGCATCGATGTCAACAGCATTAGATCGGTGAATTCTTCATCAGCTGCTTATATTGATGATAACAAGGAGTACAAGAGTATGAATCTTCCAAGTGGAGATTCTATGCAAGTTTGGATAGACTGCAGTGGCACAAATATTGAAGTAAGAATATCGCCTATTGGTGCTTCTAGGCCAAAGATAGCATTAGTGTCATCACAACTTAATCTTTCTTCTGTACTTTTGGACGAAATGTATGTAGGGTTTTCGGCTTCTACAGGAGACGTTACAGCTTTCCATTATGTTCAAGAATGGAGTTTCAGTTTGAATGATGATGCTGAAGCTCTTGACGTCGAACATATTCAACCTATTCCTCATCAATTTAACACAGAAAAGCATTTGCAACCTATAACTGTTGCATTGCCATTCGTTGGAGTGATTATTTTGCTTGTTTTACTGTTTGCTGCTTATTTTGTTATCAAAAGAAAGAGGAAATTCTCTGAGTTATTGGAGGACTGGGAAATTGAATATGGACCTCATAGGTTCACATACAAAGATCTTTTCAAAGCTACAAAAGGTTTTCAAGAAGATAATCTTCTCGGGGTAGGAGGATTCGGTAGAGTCTATAAAGGGGTCCTTCCAAAATCAAATCTTGAAATTGCCGTGAAGAAAATATCTCATGAATCACAACAAGGAATGAAAGAATTTGTAGCAGAAATAGTGAGCATGGGGAGGTTGAGGCATAGAAATCTAGTACAACTTCTTGGCTACTGCCGAAGACAAGGAGAGCTCTTACTGGTGTACGAGTTCATGCCCAATAGTAGTCTAGATAAATTCTTATTTGGTGATAAAAAGGCAACACTGAACTGGAAGCAGAGGTTTCAAGTGATACAAGGAGTAGCATCAGGACTTCTATATTTACACGATGGGTGGGAGCAAGTAGTCATCCATAGAGACATAAAGGCAGCAAACGTTTTGTTAGATTATGAGCTAAATGGAAAACTAGGTGATTTTGGTCTGGCAAGACTATACGATCATGGAAGCAATCCTCAAACAACTCATATAGTTGGAACTCTTGGTTACTTGGCACCTGAACTAAGCAGGACAGGCAAAGCTACCACGCAGACAGATGCATACGCTTTTGGCGCGTTCTTACTTGAAGTAGCATGTGGTAAGAGGCCAATGGACATGAGAGGGATGAATTTGGTGGATTTGGTAATGGGATGTTGGAAAAGAGGGGATATTATGGAAGCTAGGGATTTGAGTTTGGGAAAAGAGTATGATGAGAAGGAAATGGAGTTGGTACTGAGATTAGGGTTGTTTTGTTCACATCCTGATCCTTCTGCTAGGCCTAGCATGAGGCAAGTTGTGCAGTTTTTAGGAGGTGATGCTGTGTTGGATAGTATGTCTTTTGACTTCGACAGTGCTCCCAGTAGAGCTTATGATCAGTCTTTTGATGATTTCATTGCTTCCATGGAATATGCATCTTCCTCGTGCAATACCACCTTTGCTGCAAATTCTTCTTCACAGTTTAGTACTAAATGA

Protein

Gene

>g530150.t1
ATGTACCTATCGCCGACGAACTTTTGGCTGGACATAAGAGCCTATATGGAGAGTCGACCACAAGATAATAATCAAGTAGAAGAGAGGTGATTATATATCCATATGAAATACTGTGGAGTAATTTGTTGGTAAAGCATAAAAATCTCCTAATACAATCCTTTTTGAAAAAAATACATAGGAACTTGCTATGGCACAGGTAGAATCAACCTTTTTGTTGTTGAATGTGAACCTTTTTGTGTTAAATATGAAATGGAGTTGTATTAAAATACAGCTTTCCAAAATCCATCTATTATAGGAGGCTTTTCAATACCCAAACTGATTATTTTTTCAAGCCATAAACCTCATGCAAGTGTGAAATTTTAGAATGATCCTCCAAGGCCCAAAGAATAGTGGCTAGAGAACTGCGGATCTGATATTGGAAGGTGGAAAATATAAGGCAACGATATATTGTACAACTGAGATTAATTTGTCATTTTCATGACTAAAATTTCGGACGTACAACAATTATTGAAAGTCTAACATCACGCCTCATCTAGTATTACACGGAAGATCCAGCAAATCCTCTTTGCCAGCTCACATTGTGCATGTCTCTCTCTCTCAGTTAAAATTTCGCTGGTGAATTTTTGCAAATTGAATACCGTTATGTACTTTTGGTGTGATTTTCTTTTCATTTTCCTCAACTTGTGATGCAGTGCTTACCTTAATTAGCAAAGTCGAGCGACCTAATGAAGCTCGGCAACGACCTAATTCCACCACCAACCTCAAAGCTCGGCAACGACCTAATTCCACCACCAACCTCAATCGCCATAGCCGCGACTTAGACCCAATCTCGTTTACCGCGACCTACCCCTCCACCACTTGCCGCGACCGACCACATCACCAAATGCTGCGACCTAACCCTCCTACACGACCTAACCTTCACCATGAGCAAACCCTAGATCGCGAACAGCTCACAATAAGTCGCGAGATCTCCTGCCTCGTTAACACGCAAAGCTATATGTCGCGACTCCAAATTAGGTCGCGAACGACCTATTCCAGTAAGTCGCAAGCGACCTACCACCTACCGAATTAAAACCCTAAGTCGCGAAGATTTCTTTGCCGCCTTTTTCTTAGCTCGTGTGAATTGTTAAGTCGCGAAGAACGACCTACTGTAAGTCGCGAATGAAGCTCCACTAAGTCGCGAATGTTTCTCCAACTTAGTTCGTGAACCGAGATACTTAGGTCGCGAAGGGAAAAGTTAAGTCGCGAACGACTTTATTTTAAGTCGTGTGAAGAATTTTAAGTCGCTGCCTATCCTTTGAGTCGCGTACTTTATTTAGGTCGCGTACGTTGTCATTTGTTTTGTTAAGTCGTTTGTACTGTGTCGTGTACATATTGTGTTGTCCATATTAAGTCGCGTATGATATTGTAATATTTTAAGTCGCAAGTGTTAGGTCGTGGCCGACCTAAGTGTTGTCAAAATGTTGAGAAATGTGTGTGTTGTAAACTCTATAAATAGCGGGGTTAAGTCATTTGTAATGGTTGTTGAAAATTGAATAAAATTTTCCCATTTTGATTGCTTTGTGCTTTCCTTAAATTGGTAGTCGAGTGAAAATCTCCTATCTCCACTTCGGCATTCGAGTGCGCTCGAATCAACGAACGTTGAAGCCGATTCACGGAATCAAGTGCGCTTGATCAACGTCGAAGAATCGTAGATCCTTCATCACGGTATTGTGCGCGATCAACGTGTTAAGGATAGCTAGAATCCGGTATCTCTTGAGATCAACGGTTTTGGGCATTTTCGGCATCATTCAATCCACCGATTGCTAATTCCATCGACATATCAAGTTTTTGATTAATCCGCTGCGTCAACTTGGTTGCTGAACAAAATTGATGCAAAATTTTCCACGATTGATCCTTGATAGGAAATACTTACTGCCACTGCTTATAGTATAACTGAATATGCAATAAACAGTTGGTGTAAAAGTACCAGTTTAGTATATGTTTCATCCTTTTATGTTGATAGAATATATTTTACGTATATTCTAGACGTTAGAATATTTCCTTATATTATCTGCATTTATTCTCTGATATTTTCTGCATTTATTCTAACGTCTAGAATATATGTAAAGTATATTCTATCAAATGTCAACGTCTGCACCCCTTGATCATATTGTCAACGTTATTTGAGAATTTTGATGTACAGTGGTCTTTCCAAAGCTAGACTATAAATATAGATGATAGAATTTGAAACTGGAAAAGGTCAATCTTTTATTTCATTTCCCCTTTGTGTGGGAAAGTCTTACATGCAGGTGTTGGATGCAAAAGGTAAGGATTCATGTGACGCTCTTTTACCAATTGAGAAGTAGAAAACCATTTGCGCCACTACAGTCAACGATAATTGATTACTATGTCGTATCAATCCAGTCTTCACAAGATGCACTGCTTTAGGCAGCTAAAAAGAACCACACTATGATAAAAGTGAGAGCATGGACGTGGACAAATCCTGTTTAGAAGATGAAGTGTACATTTGCTTTAGGTAAAACAAGAGCAAGAATCCCCAAGAATAGATTGTCCAGCATCGAATTAGCAGAAAAATGTGCAAAAGTTTAAGCCACTATGATGTATGCAAACATCCATCAAAGTAACTGAATGTATGTCAAAGCAGTCATAAATACCTCAACTTTAGTCTTAAACCTTTTATTTGGTCGATGACCATCAACAAAATGGTAAAGCCTCTGAGCTCTGTTTACAAATGTTTTGGGTTGTCAATAATACATATTATTGATCCTGACAATTCAACTTAAAATCAGGTTTGTCCAGATAGGCAGAGAGGTGAATCACTTTAACATAAGAACTAAGAAGAGACAAGTTACTGTTCCTTTTCTTATTGGTTCATGTTTCGTCTTATTGGGGACAAATCGCTGTCTGCATTTATTGAGATATAGCTCACAATTTAAAGTCTATTTTGGTGAAGATGAAGTTGACAACTGGATAAAAATTTGGAAAGAACTTCAAAGGTAAACATATGGTCGAAGTTTCTACAAAGAAAAACAAAAAAAATCACTTCAGCCATGTTACTGAATTTTGTAATATCTATCCTGTTCCTAAAACTTGCTTCGTCTTCTAACACTACTAGTTTCATCTTCAACAAATTTAATCCCACTGACTTGACTCTGTACGGATTATCAGAGATCACAAACAGTGGCCTTCTCCAGCTCACAAACAACACAATTCTTCAATCCGGCCGTGCGTTTTATCCACACCCTATTCAATTCAAGCACAAATCCTTTCATACAACCTTCATCTTTGCAATAGTACCGGAATACCCCAATATAAGTAACCATGGCATGACCTTTCTAATCTCCTCAACTAAAGAGATTACAGGTACACCTGGTCCTTTCTTCGGGATCTTCAATGAGACAAATAAATTCAACTCGAGTAACCTGTTAGCAGTTGAGATGGACACTAGCAAGACGATAGGATTCAAAGACATCGATAACAATCATATTGGCATCGATGTCAACAGCATTAGATCGGTGAATTCTTCATCAGCTGCTTATATTGATGATAACAAGGAGTACAAGAGTATGAATCTTCCAAGTGGAGATTCTATGCAAGTTTGGATAGACTGCAGTGGCACAAATATTGAAGTAAGAATATCGCCTATTGGTGCTTCTAGGCCAAAGATAGCATTAGTGTCATCACAACTTAATCTTTCTTCTGTACTTTTGGACGAAATGTATGTAGGGTTTTCGGCTTCTACAGGAGACGTTACAGCTTTCCATTATGTTCAAGAATGGAGTTTCAGTTTGAATGATGATGCTGAAGCTCTTGACGTCGAACATATTCAACCTATTCCTCATCAATTTAACACAGAAAAGCATTTGCAACCTATAACTGTTGCATTGCCATTCGTTGGAGTGATTATTTTGCTTGTTTTACTGTTTGCTGCTTATTTTGTTATCAAAAGAAAGAGGAAATTCTCTGAGTTATTGGAGGACTGGGAAATTGAATATGGACCTCATAGGTTCACATACAAAGATCTTTTCAAAGCTACAAAAGGTTTTCAAGAAGATAATCTTCTCGGGGTAGGAGGATTCGGTAGAGTCTATAAAGGGGTCCTTCCAAAATCAAATCTTGAAATTGCCGTGAAGAAAATATCTCATGAATCACAACAAGGTAAAAATGCCAGTATTTATGTTATGCTTTTTTTCTCTTTCTCAGAACCAAGCTTAGGCTTATTACCCACAATAGATAGTCTATAAATCACAAAGGCTTATGCTTTTTTGATGATAGGAATGAAAGAATTTGTAGCAGAAATAGTGAGCATGGGGAGGTTGAGGCATAGAAATCTAGTACAACTTCTTGGCTACTGCCGAAGACAAGGAGAGCTCTTACTGGTGTACGAGTTCATGCCCAATAGTAGTCTAGATAAATTCTTATTTGGTGATAAAAAGGCAACACTGAACTGGAAGCAGAGGTTTCAAGTGATACAAGGAGTAGCATCAGGACTTCTATATTTACACGATGGGTGGGAGCAAGTAGTCATCCATAGAGACATAAAGGCAGCAAACGTTTTGTTAGATTATGAGCTAAATGGAAAACTAGGTGATTTTGGTCTGGCAAGACTATACGATCATGGAAGCAATCCTCAAACAACTCATATAGTTGGAACTCTTGGTTACTTGGCACCTGAACTAAGCAGGACAGGCAAAGCTACCACGCAGACAGATGCATACGCTTTTGGTGCATTTTTACTTTTAACTTCAAGTTCATCATCATCATCTTCATCTTTCCTACCTTTTTTCTACTAGTATAGGGATAAAGAATTTTCATATTCAGTCTGAGTTCCTATTTAAAGTTATTTCTCTATTTATTTTTTATTCAGGAAAAAGTAGGAGTATTTACTGTGTATATTATCTATAGCAACAACCTAAACTAATCTAGATATCCTAGCATTGAACCGAAGATCGCTGGTAGTATCTTTTGTCCCCTATGAGTTCTGTACATTATAAGTTTTCATTCTCTATAATGAATTCTCACCCTCTGCAAGTTTCTAATTTGAATGTGTACAGCTAGAAGCACTCTAGTTTGCACTTCCTAATAATATGATGAAGTACCAGGTAGTGCAAAACCTGGTGTCTTTAGCTCCATACAGTGGTGTGGTGCTACGGGCACCCGTTTTTGCACTTCTTGATACCACATCATGCTAGCAGGAAGTGCAGACTTGGAAGGTTTTAGTACTACACATTATATATTATGTTTACAACTTTTTTGCCTTGAAAATTTTAGTGTACAATTTTTTTCCCTGAATGTATACATTGTATTTTTTCTGCAGGCGCGTTCTTACTTGAAGTAGCATGTGGTAAGAGGCCAATGGACATGAGAGGGATGAATTTGGTGGATTTGGTAATGGGATGTTGGAAAAGAGGGGATATTATGGAAGCTAGGGATTTGAGTTTGGGAAAAGAGTATGATGAGAAGGAAATGGAGTTGGTACTGAGATTAGGGTTGTTTTGTTCACATCCTGATCCTTCTGCTAGGCCTAGCATGAGGCAAGTTGTGCAGTTTTTAGGAGGTGATGCTGTGTTGGATAGTATGTCTTTTGACTTCGACAGTGCTCCCAGTAGAGCTTATGATCAGTCTTTTGATGATTTCATTGCTTCCATGGAATATGCATCTTCCTCGTGCAATACCACCTTTGCTGCAAATTCTTCTTCACAGTTTAGTACTAAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020244130.1	7.4e-227	L-type lectin-domain containing receptor kinase IV.1-like isoform X2
Swissprot	O80939.1	1.7e-180	Lectin Receptor Kinase 1
trEMBL	A0A6J0PDB4	1.3e-204	L-type lectin-domain containing receptor kinase IV.1 isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G37710.1	53.61	0.0	658	LecRK-IV.1;RLK	receptor lectin kinase

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g530150	AT2G37710.1	610	265	8	66	658	20	628	53.61	0.0	658
g530150	AT3G53810.1	613	279	8	64	658	18	629	51.39	0.0	654
g530150	AT4G02420.1	629	277	9	55	658	10	631	50.87	4e-180	628

Ortholog group

Species	Genes
Allium cepa	g530150.t1
Allium fistulosum	AfisC3G04457
Allium sativum	Asa0G03524.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00139.16	Lectin_legB	Domain	71	306	212.6	5.7e-63
PF00069.22	Pkinase	Domain	382	646	161.0	3.2e-47

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0001101	P	response to acid chemical
GO:0002229	P	defense response to oomycetes
GO:0002239	P	response to oomycetes
GO:0016020	C	membrane
GO:0006952	P	defense response
GO:0042742	P	defense response to bacterium
GO:0005623	C	cell
GO:0006950	P	response to stress
GO:0007275	P	multicellular organism development
GO:0008150	P	biological_process
GO:0042493	P	response to drug
GO:0009555	P	pollen development
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009617	P	response to bacterium
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009751	P	response to salicylic acid
GO:0010033	P	response to organic substance
GO:0014070	P	response to organic cyclic compound
GO:0046677	P	response to antibiotic
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0042221	P	response to chemical
GO:0043207	P	response to external biotic stimulus
GO:0044464	C	cell part
GO:0048229	P	gametophyte development
GO:0048856	P	anatomical structure development
GO:0050896	P	response to stimulus
GO:0051704	P	multi-organism process
GO:0071944	C	cell periphery
GO:0098542	P	defense response to other organism
GO:1901700	P	response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network