result

Gene information

Detail information of g530204


Location
GeneChrStartEndStrand
g530204Scaffold_91728:HRSCAF_474814119630121322+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020250516.17.2e-43probable WRKY transcription factor 41
SwissprotQ8H0Y8.22.2e-28WRKY DNA-binding protein 41
trEMBLA0A1R3L6075.2e-43WRKY domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G11070.136.135e-36 148AtWRKY41;WRKY41WRKY family transcription factor

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag530204.t1
Allium fistulosumAfisC4G01787
Allium sativumAsa4G01563.1
Arabidopsis thalianaAT4G11070.1; AT4G11070.2; AT4G23810.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03106.12WRKYDomain11317285.71.8e-24

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000302Presponse to reactive oxygen species
GO:0001067Fregulatory region nucleic acid binding
GO:0001101Presponse to acid chemical
GO:0002376Pimmune system process
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006952Pdefense response
GO:0042742Pdefense response to bacterium
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0006955Pimmune response
GO:0006979Presponse to oxidative stress
GO:0007275Pmulticellular organism development
GO:0007568Paging
GO:0008150Pbiological_process
GO:0042493Presponse to drug
GO:0009636Presponse to toxic substance
GO:0009507Cchloroplast
GO:0009536Cplastid
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009617Presponse to bacterium
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009751Presponse to salicylic acid
GO:0009814Pdefense response, incompatible interaction
GO:0009816Pdefense response to bacterium, incompatible interaction
GO:0009889Pregulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0010033Presponse to organic substance
GO:0010035Presponse to inorganic substance
GO:0010150Pleaf senescence
GO:0010193Presponse to ozone
GO:0010200Presponse to chitin
GO:0010243Presponse to organonitrogen compound
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010628Ppositive regulation of gene expression
GO:0044212Ftranscription regulatory region DNA binding
GO:0014070Presponse to organic cyclic compound
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0046677Presponse to antibiotic
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0031347Pregulation of defense response
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0042221Presponse to chemical
GO:0042542Presponse to hydrogen peroxide
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044444Ccytoplasmic part
GO:0044464Ccell part
GO:0045087Pinnate immune response
GO:0048366Pleaf development
GO:0048367Pshoot system development
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048583Pregulation of response to stimulus
GO:0048731Psystem development
GO:0048827Pphyllome development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051254Ppositive regulation of RNA metabolic process
GO:0051704Pmulti-organism process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0080134Pregulation of response to stress
GO:0097159Forganic cyclic compound binding
GO:0098542Pdefense response to other organism
GO:0099402Pplant organ development
GO:1901363Fheterocyclic compound binding
GO:1901698Presponse to nitrogen compound
GO:1901700Presponse to oxygen-containing compound
GO:1902680Ppositive regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0090693
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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