result

Gene information

Detail information of g530292


Location
GeneChrStartEndStrand
g530292CHR2264371229264389751+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020275280.11.4e-282B3 domain-containing protein Os07g0679700-like isoform X2
SwissprotQ6Z3U3.12.7e-217B3 domain-containing protein Os07g0679700
trEMBLA0A5P1E9I41.0e-282B3 domain-containing transcription repressor VAL2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G32010.147.410.0 686HSI2-L1;HSL1;VAL2HSI2-like 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag530292.t1
Allium fistulosumAfisC2G03127
Allium sativumAsa5G02934.1
Arabidopsis thalianaAT4G32010.1
Oryza sativaLOC_Os07g48200.1; LOC_Os07g48200.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family28838758.25.4e-16
PF07496.12zf-CWDomain54058249.33.3e-13

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005739Cmitochondrion
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0008150Pbiological_process
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009737Presponse to abscisic acid
GO:0009743Presponse to carbohydrate
GO:0009744Presponse to sucrose
GO:0009889Pregulation of biosynthetic process
GO:0009890Pnegative regulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0010033Presponse to organic substance
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010558Pnegative regulation of macromolecule biosynthetic process
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0010629Pnegative regulation of gene expression
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031327Pnegative regulation of cellular biosynthetic process
GO:0033993Presponse to lipid
GO:0034285Presponse to disaccharide
GO:0042221Presponse to chemical
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044444Ccytoplasmic part
GO:0044464Ccell part
GO:0045934Pnegative regulation of nucleobase-containing compound metabolic process
GO:0048519Pnegative regulation of biological process
GO:0048523Pnegative regulation of cellular process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051172Pnegative regulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051253Pnegative regulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0097305Presponse to alcohol
GO:1901700Presponse to oxygen-containing compound
GO:1902679Pnegative regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903507Pnegative regulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000113Pnegative regulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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