Detail information of g532058


Location
GeneChrStartEndStrand
g532058Scaffold_91905:HRSCAF_47499199521122031-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247148.16.6e-236histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4
SwissprotQ8GZB6.24.9e-188Suppressor of variegation 3-9 homolog protein 4
trEMBLA0A5P1E0U54.7e-236Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G13960.160.480.0 648KYP;SDG33;SUVH4SU(VAR)3-9 homolog 4

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag122784.t1; g251451.t1; g532058.t1
Allium fistulosumAfisC1G00857; AfisC3G06131; AfisC8G03467
Allium sativumAsa1G01830.1
Arabidopsis thalianaAT5G13960.1
Oryza sativaLOC_Os01g70220.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02182.14SAD_SRADomain55215165.55.5e-49
PF05033.13Pre-SETFamily24634660.81.4e-16
PF00856.25SETFamily36549661.89.1e-17

Gene Ontology
AccessionOntologyName
GO:0051276Pchromosome organization
GO:0000166Fnucleotide binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000775Cchromosome, centromeric region
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003690Fdouble-stranded DNA binding
GO:0003824Fcatalytic activity
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005694Cchromosome
GO:0043231Cintracellular membrane-bounded organelle
GO:0006139Pnucleobase-containing compound metabolic process
GO:0006259PDNA metabolic process
GO:0016570Phistone modification
GO:0006325Pchromatin organization
GO:0006464Pcellular protein modification process
GO:0006479Pprotein methylation
GO:0006725Pcellular aromatic compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0006996Porganelle organization
GO:0008150Pbiological_process
GO:0008168Fmethyltransferase activity
GO:0008170FN-methyltransferase activity
GO:0008213Pprotein alkylation
GO:0008276Fprotein methyltransferase activity
GO:0008327Fmethyl-CpG binding
GO:0008757FS-adenosylmethionine-dependent methyltransferase activity
GO:0009987Pcellular process
GO:0010216Pmaintenance of DNA methylation
GO:0010385Fdouble-stranded methylated DNA binding
GO:0010428Fmethyl-CpNpG binding
GO:0010429Fmethyl-CpNpN binding
GO:0016043Pcellular component organization
GO:0016278Flysine N-methyltransferase activity
GO:0016279Fprotein-lysine N-methyltransferase activity
GO:0016569Pcovalent chromatin modification
GO:0016571Phistone methylation
GO:0016740Ftransferase activity
GO:0016741Ftransferase activity, transferring one-carbon groups
GO:0018022Ppeptidyl-lysine methylation
GO:0018024Fhistone-lysine N-methyltransferase activity
GO:0018193Ppeptidyl-amino acid modification
GO:0018205Ppeptidyl-lysine modification
GO:0019538Pprotein metabolic process
GO:0032259Pmethylation
GO:0034641Pcellular nitrogen compound metabolic process
GO:0034968Phistone lysine methylation
GO:0036094Fsmall molecule binding
GO:0036211Pprotein modification process
GO:0042054Fhistone methyltransferase activity
GO:0043170Pmacromolecule metabolic process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043228Cnon-membrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043232Cintracellular non-membrane-bounded organelle
GO:0043412Pmacromolecule modification
GO:0043414Pmacromolecule methylation
GO:0043565Fsequence-specific DNA binding
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044427Cchromosomal part
GO:0044446Cintracellular organelle part
GO:0044464Ccell part
GO:0046483Pheterocycle metabolic process
GO:0046974Fhistone methyltransferase activity (H3-K9 specific)
GO:0051567Phistone H3-K9 methylation
GO:0061647Phistone H3-K9 modification
GO:0071704Porganic substance metabolic process
GO:0071840Pcellular component organization or biogenesis
GO:0090304Pnucleic acid metabolic process
GO:0097159Forganic cyclic compound binding
GO:0098687Cchromosomal region
GO:1901265Fnucleoside phosphate binding
GO:1901360Porganic cyclic compound metabolic process
GO:1901363Fheterocyclic compound binding
GO:1901564Porganonitrogen compound metabolic process
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11420EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMTEC:2.1.1.355 Lysine degradationko00310
Longevity regulating pathwayko04211

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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