Detail information of g532603


Location
GeneChrStartEndStrand
g532603CHR77718251077202141+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020247099.11.1e-256lysine-specific demethylase JMJ25-like isoform X1
SwissprotQ9SSE9.11.2e-185Protein JUMONJI 25
trEMBLA0A2P5D4L45.2e-229Zinc finger, RING-type domain containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G11950.147.970.0 676Transcription factor jumonji (jmjC) domain-containing protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag255533.t1; g459650.t1; g532603.t1; g86967.t1
Allium fistulosumAfisC1G04398; AfisC2G07390; AfisC7G02477; AfisC7G03329
Allium sativumAsa3G02300.1; Asa3G02916.1; Asa3G02918.1; Asa6G05198.1
Arabidopsis thalianaAT1G11950.1; AT1G62310.1
Oryza sativaLOC_Os02g01940.1; LOC_Os02g58210.1; LOC_Os02g58210.2; LOC_Os03g31594.1; LOC_Os03g31594.2; LOC_Os09g22040.1; LOC_Os09g22540.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF10497.6zf-4CXXC_R1Domain6412726.45.4e-06
PF02373.19JmjCDomain64274655.27.8e-15

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15601KDM3; [histone H3]-dimethyl-L-lysine9 demethylaseEC:1.14.11.65 Thermogenesisko04714

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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