Detail information of g54001


Location
GeneChrStartEndStrand
g54001Scaffold_30038:HRSCAF_274746602709603799-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008776389.18.3e-29myb-related protein MYBAS2-like
SwissprotQ4JL76.12.7e-24Myb-related protein MYBAS2
trEMBLA0A8K0I5T03.2e-30Myb-related protein MYBAS2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G59780.155.566e-26 112ATMYB59;ATMYB59-1;ATMYB59-2;ATMYB59-3;MYB59myb domain protein 59

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag409278.t1; g439695.t1; g54001.t1
Allium fistulosumAfisC1G03721; AfisC1G05813; AfisC2G03240; AfisC3G04397
Allium sativumAsa0G05518.1; Asa5G02706.1; Asa5G02707.1; Asa8G00586.1
Arabidopsis thalianaAT3G46130.1; AT3G46130.2; AT3G46130.3; AT3G46130.4; AT5G59780.1; AT5G59780.2; AT5G59780.3
Oryza sativaLOC_Os11g47460.1; LOC_Os11g47460.2; LOC_Os11g47460.3; LOC_Os11g47460.4; LOC_Os12g37970.1; LOC_Os12g37970.2; LOC_Os12g37970.3

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain24256.03e-15

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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