result

Gene information

Detail information of g59864


Location
GeneChrStartEndStrand
g59864Scaffold_31796:HRSCAF_298169230230238991+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020262823.10.0e+00histone-lysine N-methyltransferase ATX4-like
SwissprotQ9SUE7.36.7e-295Trithorax-homolog protein 4
trEMBLA0A6I9QV210.0e+00histone-lysine N-methyltransferase ATX4

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G27910.152.500.01018ATX4;SDG16SET domain protein 16

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag59864.t1
Allium fistulosumAfisC7G02799
Allium sativumAsa3G02590.1
Arabidopsis thalianaAT4G27910.1; AT5G53430.1
Oryza sativaLOC_Os01g11952.1; LOC_Os01g46700.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00855.14PWWPDomain18728452.74e-14
PF00628.26PHDDomain36641832.55.5e-08
PF13831.3PHD_2Family56960343.31.7e-11
PF13832.3zf-HC5HC2H_2Domain61072298.42.4e-28
PF00856.25SETFamily85596272.06.6e-20

Gene Ontology
AccessionOntologyName
GO:0005575Ccellular_component
GO:0005911Ccell-cell junction
GO:0008150Pbiological_process
GO:0009292Pgenetic transfer
GO:0009294PDNA mediated transformation
GO:0009506Cplasmodesma
GO:0009893Ppositive regulation of metabolic process
GO:0009987Pcellular process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010638Ppositive regulation of organelle organization
GO:0019222Pregulation of metabolic process
GO:0030054Ccell junction
GO:0031056Pregulation of histone modification
GO:0031058Ppositive regulation of histone modification
GO:0031060Pregulation of histone methylation
GO:0031062Ppositive regulation of histone methylation
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031399Pregulation of protein modification process
GO:0031401Ppositive regulation of protein modification process
GO:0032268Pregulation of cellular protein metabolic process
GO:0032270Ppositive regulation of cellular protein metabolic process
GO:0033043Pregulation of organelle organization
GO:0033044Pregulation of chromosome organization
GO:0044764Pmulti-organism cellular process
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051128Pregulation of cellular component organization
GO:0051130Ppositive regulation of cellular component organization
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051246Pregulation of protein metabolic process
GO:0051247Ppositive regulation of protein metabolic process
GO:0051569Pregulation of histone H3-K4 methylation
GO:0051571Ppositive regulation of histone H3-K4 methylation
GO:0051704Pmulti-organism process
GO:0055044Csymplast
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:1902275Pregulation of chromatin organization
GO:1905269Ppositive regulation of chromatin organization
GO:2001252Ppositive regulation of chromosome organization

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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