result

Gene information

Detail information of g60152

Location

Gene	Chr	Start	End	Strand
g60152	Scaffold_31872:HRSCAF_298970	202821	204909	+

Sequences

CDS

Protein

Gene

>g60152.t1
ATGTGTCCTATTCCGCCTCTATTACCGGCCGATTCATCGGATGAAGTAATTGTGATGTTTTTGGATTCAAGGAACGTTGATGATCCGATGCCATCGAATGTGATTGCTGATGTCGATCCATTCACTATCGACCCTCAACTCTCTTCAGGTTGTTCCTTCTTATTATAAGATATAATTATGCTCTCTTAAGTCTATTTACTGTGATTGTTAGCGATTAACTAATATTAGAGTTAAGAACTGATTTTGATTCAGAATAGATTTACGAAATCCAAATTTGGGAACTTATACGTGTTGATTCAAAGTGCAAATTTACTTAACCTATATTATCTGGGACTTATGACAACCATAATTGGGGGTTTTGAGACTTTAAGGTTATTGTTATGTTGTGTTTGCTGATGACTAAGTATTTTTGCAACTGTGCTATAAATGAATTCAGTGATAAGTTATTTTTGCCATAATCCTTTTTTATGATTGGAGCTTTTTTATGTTAACCAAAAGTGAACAATCATTATGTTTAGTAGTTTACTAAGAGTCTTTGTTGTTGGATTTTATGACTTCATTGATGACTGACTAGGACGCATAGTTTATACATTGATGTCTGCCTATTTTCCTCTATCTCTAAGCCCGGATTTTCTTTTCTACATACTTGTAATAAAATTCTAGTAATTGGAAGACCTTGTCTTACAATACACACAATTTTAGTTAGGCGATGTAGCCATTGAACACCAGTGAGAATTAATTTCATACTCAACTTATCGTGATTTAGTATATGATCTTGATTTGGAATTATGAGAATTTAACTTTGGAGTTGTGCAAAGTTTGACCACAATAACATGACATGAATATATCCAGTGCTACTATTGCTCACTTTTATCTCAATCTTTAAAACCAGAAACATCACTTTGTCAACATTAGTTGGTATTAATCCTCTATATGATTAGAAGTCAATAATGTTCTGTTAGTTAGTTATGTGCACTCAGAGTGAATGTTTGTACCACAGATAATCATTGGTACATGTACAAGTCGGTAGTTTCAGACATTTACGGTAAAGAAAGCGTCATCAAAGGAAAAAATGGATATTGGGAATTTATGAATGACATCAATATACCTACCAGTACTGCAATTGGTATGAAAATTACTAGAGAATTTTACTTGGGTAATGTAACTTTTGGAGATAAAACCGCCTTTAGGATGCATGAGTATCATGTCAAACTTGAGAAGAACAGGTTCAAGGTATTCAGTTTATGTTTGTCATTAACTTTATCATGTTTTTTTAATTGATAATATCAACGTAATTAGCTCAATTTGCGTATTTACAGGAAAACAGTTTGTCTAGAATATTCTTAGAAATTGAAGTGAAAAAAGAAGAAAAAAGCAACATCGATGGTGAGAACATCGAATCAAAGTTGCCATGTTTGGTAAACCAGCAAGAAAAAAACTCTTCTTTGAAGCAATGCCAAAATGACCTTGAGGTATGATAAGTTACATTTTATTTCAATGGAAAACAAAATTTTATACTTTATGAAAATTGTTTAGGTGAGTGAAGAAAATGAAGGGCAACCAATATTACCAAGCGGTCTGATGAACGAGGAAGCTGGGTTTGAAGGTTTCATCGAGTTCAATGATTTTGGTGCAGAAGATGGAAGCTCATCGTTTTCGGTTAATACAAGTAGCAGTGTGAAGTCAATGACTTCTGATGAGCACTTTGAATCGGAAATTGTGGGATTTGATCCAGAAGCTGTGTTGAGTGATATAGCTAATGATGTAAACGATGTGAATGCATCAGTTGGTTCTGATCCAGTAGTCACCCGACCACCACTCTCCATTGGTATCTTACAAAAAAAAAAACACTTAAATTTTTATTTATTGCATTTATTTTTTGGGCGGTGATATCTGAATTACTTTGACAGACGCTCCACGTGTGTTGAGGCAGAGTAAAAGCGAAGTGTCGACCTCCAGTTCATCTGAAAGTAGTGGTGATAGCACATCAGCAAAGCATTCTGGAAACGGCAGTTCCTATAAACGCGTAAAATCAAGGTCTGCCAGGCGAATGGCAAAGCTAGGTAAAAGGTACTGCTGCTTTATTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020242206.1	2.9e-27	protein ATAF2-like
trEMBL	A0A8B8ZSB5	2.1e-24	NAC domain-containing protein JA2-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G77450.1	26.45	5e-07	52.4	anac032;NAC032	NAC domain containing protein 32

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g60152	AT1G77450.1	155	96	6	12	149	19	172	26.45	5e-07	52.4
g60152	AT1G69490.1	190	113	9	4	168	9	195	25.79	6e-06	48.9

Ortholog group

Species	Genes
Allium cepa	g104440.t1; g314036.t1; g314087.t1; g538121.t1; g60152.t1
Allium fistulosum	AfisC1G03081; AfisC2G02456; AfisC2G02459; AfisC2G02462; AfisC2G04834; AfisC2G07932; AfisC3G00217; AfisC3G04516; AfisC4G04228; AfisC7G02427; AfisC8G03693
Allium sativum	Asa0G04200.1; Asa5G02353.1; Asa5G02355.1; Asa5G02359.1; Asa5G02360.1; Asa5G02366.1; Asa5G02375.1; Asa5G02378.1; Asa5G02379.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02365.12	NAM	Family	13	119	27.5	3.8e-06

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network