Detail information of g6046


Location
GeneChrStartEndStrand
g6046Scaffold_31921:HRSCAF_299583568599569165-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPKA59158.12.1e-132Homeobox protein knotted-1-like 3
SwissprotO04136.11.0e-128KNAP3
trEMBLA0A835VMH94.2e-135Homeobox protein knotted-1-like 3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G25220.284.252e-135 479KNAT3KNOTTED1-like homeobox gene 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag109917.t1; g6046.t1
Allium fistulosumAfisC2G07493
Allium sativumAsa4G03695.1; Asa6G00294.1
Arabidopsis thalianaAT5G11060.1
Oryza sativaLOC_Os02g08544.1; LOC_Os02g08544.2; LOC_Os06g43860.1; LOC_Os06g43860.2; LOC_Os08g19650.1; LOC_Os08g19650.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03790.10KNOX1Family7111263.21.2e-17
PF03791.10KNOX2Family13418269.41.4e-19
PF03789.10ELKDomain24026127.71.8e-06
PF05920.8Homeobox_KNFamily28031963.51.1e-17

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K15613MEIS1; homeobox protein Meis1EC:- Signaling pathways regulating pluripotency of stem cellsko04550

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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