result

Gene information

Detail information of g62967


Location
GeneChrStartEndStrand
g62967CHR1262534469262535806-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020584529.16.7e-165DELLA protein SLR1-like
SwissprotQ2TN88.21.0e-154Protein SLENDER RICE1
trEMBLA0A2I0B7I04.1e-164DELLA protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT1G14920.165.772e-147 519GAI;RGA2GRAS family transcription factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag377522.t1; g479632.t1; g62967.t1
Allium fistulosumAfisC3G00514; AfisC4G01998
Allium sativumAsa2G00237.1; Asa2G00240.1; Asa4G02090.1
Arabidopsis thalianaAT1G14920.1; AT2G01570.1
Oryza sativaLOC_Os03g49990.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12041.5DELLADomain257451.37.3e-14
PF03514.11GRASFamily74440446.18.2e-134

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000910Pcytokinesis
GO:0001067Fregulatory region nucleic acid binding
GO:0001101Presponse to acid chemical
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0007165Psignal transduction
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006808Pregulation of nitrogen utilization
GO:0006810Ptransport
GO:0006950Presponse to stress
GO:0006970Presponse to osmotic stress
GO:0006972Phyperosmotic response
GO:0007049Pcell cycle
GO:0007154Pcell communication
GO:0008150Pbiological_process
GO:0009314Presponse to radiation
GO:0042493Presponse to drug
GO:0009416Presponse to light stimulus
GO:0009628Presponse to abiotic stimulus
GO:0009639Presponse to red or far red light
GO:0009651Presponse to salt stress
GO:0009719Presponse to endogenous stimulus
GO:0009723Presponse to ethylene
GO:0009725Presponse to hormone
GO:0009737Presponse to abscisic acid
GO:0009739Presponse to gibberellin
GO:0009740Pgibberellic acid mediated signaling pathway
GO:0009751Presponse to salicylic acid
GO:0009753Presponse to jasmonic acid
GO:0009755Phormone-mediated signaling pathway
GO:0009863Psalicylic acid mediated signaling pathway
GO:0009867Pjasmonic acid mediated signaling pathway
GO:0009889Pregulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0009893Ppositive regulation of metabolic process
GO:0009894Pregulation of catabolic process
GO:0009937Pregulation of gibberellic acid mediated signaling pathway
GO:0009938Pnegative regulation of gibberellic acid mediated signaling pathway
GO:0009966Pregulation of signal transduction
GO:0009968Pnegative regulation of signal transduction
GO:0009987Pcellular process
GO:0010029Pregulation of seed germination
GO:0010033Presponse to organic substance
GO:0010187Pnegative regulation of seed germination
GO:0010218Presponse to far red light
GO:0010232Pvascular transport
GO:0010233Pphloem transport
GO:0010453Pregulation of cell fate commitment
GO:0010454Pnegative regulation of cell fate commitment
GO:0010468Pregulation of gene expression
GO:0010476Pgibberellin mediated signaling pathway
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0010628Ppositive regulation of gene expression
GO:0010629Pnegative regulation of gene expression
GO:0010646Pregulation of cell communication
GO:0010648Pnegative regulation of cell communication
GO:0044212Ftranscription regulatory region DNA binding
GO:0014070Presponse to organic cyclic compound
GO:0046677Presponse to antibiotic
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0022402Pcell cycle process
GO:0022414Preproductive process
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0023051Pregulation of signaling
GO:0023057Pnegative regulation of signaling
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032870Pcellular response to hormone stimulus
GO:0033206Pmeiotic cytokinesis
GO:0033993Presponse to lipid
GO:0035690Pcellular response to drug
GO:0040008Pregulation of growth
GO:0042176Pregulation of protein catabolic process
GO:0042221Presponse to chemical
GO:0042538Phyperosmotic salinity response
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0045595Pregulation of cell differentiation
GO:0045596Pnegative regulation of cell differentiation
GO:0045926Pnegative regulation of growth
GO:0048518Ppositive regulation of biological process
GO:0048519Pnegative regulation of biological process
GO:0048523Pnegative regulation of cellular process
GO:0048580Pregulation of post-embryonic development
GO:0048581Pnegative regulation of post-embryonic development
GO:0048583Pregulation of response to stimulus
GO:0048585Pnegative regulation of response to stimulus
GO:0048638Pregulation of developmental growth
GO:0048640Pnegative regulation of developmental growth
GO:0048831Pregulation of shoot system development
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051093Pnegative regulation of developmental process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051179Plocalization
GO:0051234Pestablishment of localization
GO:0051239Pregulation of multicellular organismal process
GO:0051241Pnegative regulation of multicellular organismal process
GO:0051246Pregulation of protein metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051301Pcell division
GO:0051321Pmeiotic cell cycle
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0061640Pcytoskeleton-dependent cytokinesis
GO:0065007Pbiological regulation
GO:0071229Pcellular response to acid chemical
GO:0071236Pcellular response to antibiotic
GO:0071310Pcellular response to organic substance
GO:0071370Pcellular response to gibberellin stimulus
GO:0071395Pcellular response to jasmonic acid stimulus
GO:0071396Pcellular response to lipid
GO:0071407Pcellular response to organic cyclic compound
GO:0071446Pcellular response to salicylic acid stimulus
GO:0071495Pcellular response to endogenous stimulus
GO:2000377Pregulation of reactive oxygen species metabolic process
GO:0080050Pregulation of seed development
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:0097305Presponse to alcohol
GO:1900032Pregulation of trichome patterning
GO:1900033Pnegative regulation of trichome patterning
GO:1900140Pregulation of seedling development
GO:1901363Fheterocyclic compound binding
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:1903046Pmeiotic cell cycle process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000024Pregulation of leaf development
GO:2000026Pregulation of multicellular organismal development
GO:2000033Pregulation of seed dormancy process
GO:2000034Pregulation of seed maturation
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000241Pregulation of reproductive process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110
GO:1905613
GO:1905614
GO:1905622

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14494DELLA; DELLA proteinEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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