result

Gene information

Detail information of g63263

Location

Gene	Chr	Start	End	Strand
g63263	CHR7	165770365	165773390	-

Sequences

CDS

Protein

Gene

>g63263.t1
ATGTCTCCGACGGTAGAGGAGCATGACTACATAGGGCTTTCCGACGCGTCTTCCAACGGCAGCAGCACGACTATCTCATCCGATAATCTCAAAACGGAGCTCCGTTTGGGTCTTCCCGGATCCGACAGCCCGGAGCGAGTTAACGGTTCTGGTTTAACTCTCGGTATCAATGTGAAAGGGTTCGGGTCCGGTTCTAAAAGAGGCTTCAATGACTGTGTTAGTGGATCTCCTAAATGGGTTTTCAATGGATCTGAGGTTGAGCTCTTTTCACCCAAGAAAGGAGAGAGTGGTAGCAACGGAGTTGGTAAAGACTCCGAGAAGAAAATTCCTGTTGCTAAGTAAGATTTTCTTTCCTGAATTTTTGGATTTTGTAAAATTAATTTAATCTTTAGAACATTGTTTTTTGTTGATTTCATATACACTAGGAATTTTGTGCTTAAAATGCTTACTGGGCATAAGAATTTCGTAATTTAGAAATTGTTTAACAAACACCTATTTCCCCAATTATGCTTTATATGTTCTGTATTTCGTGATTAAGTCGATTTAACATATTTTGAGATTTCAAGTATTATGGTGCATTAAATTGTTGCATATCATTTGAATTTGGGAACATTCTATAGTTTTAGTTAACTCTTCAGTGAAAAATGCATCAAAATTTATGTAAAAATATGTAACAAATTTTTAATAAAAGCACCAGCTGTAGGTATATGTTTGCCCTCATAGTTGGATAATTGATCTATAGTCATTTTAACCTTTGTATTGTTATAATTCAATGAAGGGCACAAGTAGTAGGATGGCCACCACTTCGTAACTCTCGGAAGAATATAATGGCAAATAATTCAAACAACACAAAGAACAAAGAAGATGCTGATGGAAAACAAGGGTCTGGATGTCTCTATATCAAAGTTAGCATGGATGGAGCTCCTTATTTAAGAAAAATCGATCTTAAAACTTACAAGAATTATAAAGAACTTTCTTTAGCACTTGAGAAAATGTTCAGCTGCTTCACTATCGGTGAGCTCTATTAATTACATTCTTCATATCACATTTTTTCAATACATTTAGATAAGTCATGTGCAAAACATTTGAATCATTACTATAGTATGTGGTATTTGTATTGTTTACTAATTGTTGCAATTCTACTGCTTCAAGGTCAATGTGGTTCGAAGAGTGAGCTTATCGAGGGATCTGAAAATGTTCTAACCTACGAAGATAAGGATGGGGATTGGATGCTTGTTGGTGATGTTCCTTGGGAGTGAGTATTGATGTCTATTTCATTACGCTCTTCTATTTTCTTACATGTTCCCTTTAAATGATCTTATTATTATCTATTTTGAAGAAAATATGATTAATCTGTATTTAGGTAGGCATTTTAGGATTGATTAAATAACCAACTGTCAATATTCCTAAAAATGAAGCGGAAAAATATACAGCACTAGATACTATGAACCATTCAAATAATTGTATTGGTGTTTCTTATTAATTGGATTCAGTTGATTGCACGGTCTCTCCCTCTGTCACACAGGCGCGCGCACACAAACACACGCGTGCGCATACACATAGAGGAAGGAATTTAGAATTCAAAATTCCATAGTTCAGATTTTGGGAGAATCTCTACTGATATACCAATAAGAGAGGATCCAAGTATATGACTATGCTAATATGTTTTGATGAATCAAATTCTGTACCCTCGAATGATTATTGGCTTTCTACTTCATATTTTCTTTCAAGGGTAATGATGTTTGCTTTCTTTTACTTGGTGTTTAACCTTACACGTTAACACACAGTCATACCTTGTGGGCCCGATCCACCCATATAGCCTAAGCTCACTAGATAACAAGATTGAATGCATACTGCTCTTAGGAAGATTCTACTTATTTTTAGTGAAGAGCTTACACTTGCAACCTCTGCTGCTTGTTTCTGTGCTATGCTCATCAAAAATCATTGAATTTTTATACAGTTCAAATACTCTCCAATGGCAAGTAAGGTAGATTTTGATTATTTTACATGATAATCAATTGACATAGCCTGGTACTTATAAGCTATGTTATACGTCTGAGGTGGTTAGTACTAGTTAGGAACATCCATAAAAATCAAGCAAGAAGAATTGGTAGTTCAATTCAATTCAAACATTGAAACTGTAAACAATAATCAATAAATGATCTACACAACAGTGCACTGCAAACAAAGAATGGATACAGATACAATAGCTCACACACTTGCGCATATAGGATAGCAATTTTTTAAACATGTGAACTCTATGTTTTTTAATAAATGATTAAAAGCCTTTAAAGTTATTTATATGTACAGTTAGATTGCTACCCTACATTAGTTTGTCAAGTATGAATAGAGAGGGGACCTTGCTACATGACTAAGGACCTCGGTTTAAAATTTTCTTATGGATTGTTGAACCTATTTCTCCGTGTATTTGTAAACTCGTTTTTTCACAAAATGCACTTAGATGTTTAACTCGTTTATTTTTGTTTTGAATGTGGCAGTATGTTCATTGAAACCTGTAGGAGGCTTCGAATAATGAAGGGTTCAGATGCAATCGGACTTGGTATGCACTTAGTTTATTTCTTATGTTCCATGCGTCATATATTTCGGAGAAGTACTACATAAATTAACCTTTTATGTATCATTCTTCTGATAAGATTCTGGTTATATATGTCAAGATACATATGCTTATTGTTGCCTTGCAGAATAACAATTAGTGGGCATTACTTTTTGCTGTCTCTTCACCCACTAGTTTATGTCGAATCCCCTTTCGTCCTCATCGCATTCCACTCTTCTTTATCCTAGTCGATAATGTTTGCACTAAACATCAGAGAGGAATCTACACACAACAAATTGTTGCACCATATCAAACAGTTTTTAACGTGAAAATTTTAAACATCTTTACTTTGAGAAATCTTCTCCATTACTCAATAGCATTGCTAAAATGATCCTATATTATTATTCTAATAGCTATTTGTTTGCTATTATTAGCTCCAAGGGCAAGCGAGAAGAGCAAGAATTGTAACTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020273570.1	5.2e-109	auxin-responsive protein IAA17-like
Swissprot	Q38826.1	3.8e-64	Indoleacetic acid-induced protein 8
trEMBL	A0A5P1FMB0	3.7e-109	Auxin-responsive protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G22670.1	49.67	1e-66	249	IAA8	indoleacetic acid-induced protein 8

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g63263	AT2G22670.4	304	102	8	2	256	33	334	49.67	1e-66	249
g63263	AT4G29080.1	299	100	9	7	258	8	305	50.50	1e-66	249
g63263	AT2G22670.3	304	102	8	2	256	16	317	49.67	1e-66	249

Ortholog group

Species	Genes
Allium cepa	g63263.t1
Allium fistulosum	AfisC7G01361
Allium sativum	Asa3G03751.1; Asa3G03754.1
Arabidopsis thaliana	AT4G29080.1
Oryza sativa	LOC_Os01g13030.1; LOC_Os01g13030.2; LOC_Os05g14180.1; LOC_Os06g22870.1; LOC_Os06g22870.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02309.13	AUX_IAA	Family	31	249	248.7	6.4e-74

Gene Ontology

Accession	Ontology	Name
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009733	P	response to auxin
GO:0009889	P	regulation of biosynthetic process
GO:0010033	P	response to organic substance
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0042221	P	response to chemical
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14484	IAA; auxin-responsive protein IAA	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network