result

Gene information

Detail information of g63722

Location

Gene	Chr	Start	End	Strand
g63722	Scaffold_32977:HRSCAF_312051	268195	271225	+

Sequences

CDS

Protein

Gene

>g63722.t1
ATGGGAGAGGAGGAAGATAAGAAGTTTCTCACTGTTGCTCCTTTTGAGTGTGCATGGCGCGAAGAACTGAGATTCAGAGAAGCGGGTCGTGGTTGCATTTCATTTGAAGCTTTTGCTCAAAATGATGTCACTTTAGTATTTAGAGAACAAGTGGGTAGCCAACAATACCATTATAAAATGGATAATTGCCCCAACTATACTATTATATTAGGAAGCCATAGAAATCGTAGATTGAAGATTGAGGTAGATGGTAAAACTGTAGTTGATGTTGCGGGTATTGGGTTGTGTTGCTCTTCATCATTTCAAAGTTATTGGATTAGCATATACGATGGGTTGATTAGCATAGGCAATGGGAGGCATCCATTTAAAAATATAGTTTTCCAATGGCGCGATACTCATCCAAATTGTAGTGTTCAGTATGTTGGATTGAGTAGCTGGGATAAGCATGTGGGATATAGAAACGTTAGTGTTTTACCCACAAATAATAATAACAGTAATCCATGGAATCATATTGATTATAAGGAGTACAAAGGAGAGAATGAGGGAGAAGGTGATAGCCACAACATGTCAGATAACTTTGAAAAATGGGGTCTAAAGAATTATCTTGAGAGCTGGGAGTTTTCTGACGTATTATTTGTTGTTGGGGATGATAAAAAGGCAGTTCCGGCTCATAAAGTAATTCTGGCAGCTTCAGGAGAATTTTCCTTCAAATCATATGATGATAGCATTATATATCTCCCTTCAGTAACTTATTTGGATTTCCATGCTTTTTTGGAGTTCATATATGCTGGCCAAACTCAAGTTAGTTTGTTAACTTTATCAGTCATTGTATTGATTCGTCGGTAATATTATATAATTTTTCCGTACATTTGGCCGTCCGAAATATTTTTTCGTATGAAACAAATAAATGAAGTTCATGAACAATTACAAAGTTTCATCTCTTTTTTTATAGGTTTTTTCTCGACCCTTATTTTAGACTAGGGAGAAATGTAGAAACAATCAGGACGAGACTGTATATGCTTTGTGGCACATGTGTAGCACGAAATAAATTATTCTCAGTCTTCTATTTTAAACCAGTTGATTATATATTGGTTTATATCGAAGCAAATTGGTTAACTTGATTAATTTTATATTTTGAATTGAAAGATAAATAAATATGTATCTATGCTCCGTAAATCATGTTTGTGTTAATTTTGAGCTATTATTTCGTTGAGTCAGCATGCTTGAATGTACTATTATTCATTTATTTGGTTTTGCTCAGATTGTAGAGCCACAACTTGTTTGCTTGCTGGAGTTAGGTATACAATTTCAAATTTCCTCATTAGTTAAGCGATGTGAAGATATTGTAGACCGTTTTAAGATGAACAAGAAACTATTTGATTCGGGTAAGAAAATTGAACTCACAAGCAGGAACTACCAAGAATGGCAGTCTGGTGATTTCCCTAAAGAACCACATCCCATTACATGCAATCTGAAGAAATTCCTTCAAAATAATGAGCACAGTGATGTAAGTATATACGTTGAGAGTCACGGTTTTCTTACTCGGTCTCACAAACTTATCCTTAGTGCTTGGAGTGCACCACTTGCAAAGGTATTTCACCTTTAATATTGATCAAGAGTGAATTTTTTCTTATATTGATTATCTTTATGAATTCCTTCAAGTACACTATGTTTCACCATCTATCGCTCAGGATGCTAAATTATTGATTAATTGCACAAACGCTCTAATTTGACATACTTTTTAACCAAGCTAGATCAGCCAAAGATTTTTTCAGTGATCAAGTTTCATCTTCAAGTTCAGTACGTAAGCTTATTTTTGTTTTTACACTATAGGGATTTAGGTTATATGGGTTTTAATGAAACATGCCGTGAGCATCAAAATATCAAAATGCTTGAAGTGTTGTATTTTGAACAATTTCTTGTTTGCAGTTTGTTTATTAAAGCTCACTTATTGGGTTTATTAAATGCAGATGTTCACAAATGGAATGAGTGAAAGCAGCTCTTCAGAAATCTCATTCGGTGACGTTTCCCCTAAAGCTTTTGAAGTGATGCTCAATTTCATGTATGGTGGTGTCTTAGAAATGGACAAAGAGGAAATAAGTTCTTTGTTAATCCCTGTGCTTATGTTAGCTGATCAGTTTGGTGTCGTAATGCTTCAGCAAGAGTGCTGTAAACACCTTTTTGAATACCTCTCAGAGGTACCTTGTCCTTTGATATCTCTCTCGTAACTTTTTTTTATTCTACTCTAACTTTATACTATATAACATATTTCCTTTTCCTTCCTTTTATGAATGTTTTGGGCCTTATGGCTTTTGGAGAAAAGTAACAATTTTAAGGTAATATATCTGAAGAATAATGCAAGATGAAAGATTATGATCTCAGTATCGAATATCTGATACTTGTAGCTGCAAATTGATATTAGGATACCGACAGCCCAAAATTTTTGGTAAAAACCAATAACTTAAGGTTGATACTAAACCTTGGTGGAACTAAATTTTCTCATCCAATCTGCATTTAGTCAGCATAGCACTATATGTAAACAATCAAAAGTATCATCGGGTTTTTTTTTTTTTTTTGAAGAATTCAATACCAATATTCCACTATTCTGATCATGTACCACAAAGTTAGTTGATAAAGTTTTAATAAACAACCCCAATAGCAAGCTATTTATTTATTTATATGCCTTGTAAGTTTGTGTGTGAGATTGATGCACAACTTCGATATCATAAATATGGCGAACGTACATGTGCAGTCCAATCACATATATTCGAACATAAATGTAATCCATCCCACATCACAACTTAACGTAAGGTTATCGATCTTTTAAGAAATCACTGTATTGTACAGTGCATGTAATATTTTGGGGAAGTGTTTCTTGTTCTTATTGTGTAATTACTGCATCAGTAAGCCGCGGCAGTGAACACAAGGCTACTGGAGGACAAAGTAGAATTAGCACATGCATTGGAGCAAAGTATTAATACATTTCATATGCATATATATGCAGGGAGGCGCAATATTTGGAAAAAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK79831.1	4.9e-195	uncharacterized protein A4U43_C01F10570, partial
Swissprot	Q8LEV3.1	5.2e-141	BTB/POZ domain-containing protein At2g30600
trEMBL	A0A5P1FSY6	3.5e-195	BTB domain-containing protein (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G30600.5	54.23	2e-144	509		BTB/POZ domain-containing protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g63722	AT2G30600.5	461	207	3	1	457	1	461	54.23	2e-144	509
g63722	AT2G30600.4	457	204	3	1	453	1	457	54.49	4e-144	508
g63722	AT2G30600.3	457	204	3	1	453	1	457	54.49	4e-144	508

Ortholog group

Species	Genes
Allium cepa	g63722.t1
Allium fistulosum	AfisC4G01807
Allium sativum	Asa4G01570.1
Arabidopsis thaliana	AT2G30600.1; AT2G30600.2; AT2G30600.3; AT2G30600.4; AT2G30600.5
Oryza sativa	LOC_Os05g27880.1; LOC_Os05g27880.2; LOC_Os05g27880.3

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF12248.5	Methyltransf_FA	Family	53	150	82.5	1.9e-23
PF00651.28	BTB	Domain	198	297	57.8	9.9e-16
PF00651.28	BTB	Domain	338	447	72.9	2e-20

Gene Ontology

Accession	Ontology	Name
GO:0000151	C	ubiquitin ligase complex
GO:0005515	F	protein binding
GO:0019941	P	modification-dependent protein catabolic process
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0006508	P	proteolysis
GO:0051603	P	proteolysis involved in cellular protein catabolic process
GO:0006511	P	ubiquitin-dependent protein catabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009056	P	catabolic process
GO:0009057	P	macromolecule catabolic process
GO:0019005	C	SCF ubiquitin ligase complex
GO:0009987	P	cellular process
GO:0010498	P	proteasomal protein catabolic process
GO:0019899	F	enzyme binding
GO:0019222	P	regulation of metabolic process
GO:0019538	P	protein metabolic process
GO:0030162	P	regulation of proteolysis
GO:0030163	P	protein catabolic process
GO:0031461	C	cullin-RING ubiquitin ligase complex
GO:0031625	F	ubiquitin protein ligase binding
GO:0032991	C	macromolecular complex
GO:0043161	P	proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043170	P	macromolecule metabolic process
GO:0043632	P	modification-dependent macromolecule catabolic process
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044248	P	cellular catabolic process
GO:0044257	P	cellular protein catabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044265	P	cellular macromolecule catabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044389	F	ubiquitin-like protein ligase binding
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051246	P	regulation of protein metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0080090	P	regulation of primary metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:1901565	P	organonitrogen compound catabolic process
GO:1901575	P	organic substance catabolic process
GO:1902494	C	catalytic complex
GO:1990234	C	transferase complex

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network