Detail information of g64607


Location
GeneChrStartEndStrand
g64607Scaffold_33286:HRSCAF_315486390011139-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrWP_077793822.10.0e+00arginine decarboxylase
SwissprotP28629.10.0e+00Biodegradative arginine decarboxylase
trEMBLA0A2D0E5N80.0e+00Arginine decarboxylase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G03720.126.743e-1789.0CAT4cationic amino acid transporter 4

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03709.12OKR_DC_1_NDomain1813486.11.7e-24
PF01276.17OKR_DC_1Domain140590649.71.5e-195
PF03711.12OKR_DC_1_CDomain615743147.32.7e-43
PF13520.3AA_permease_2Family9091300167.34.6e-49
PF08019.9DUF1705Domain13301480144.71.8e-42
PF00884.20SulfataseFamily15091767166.77.2e-49
PF00072.21Response_regDomain1767186771.07.5e-20
PF00486.25Trans_reg_CDomain1899197068.43.9e-19

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0003824Fcatalytic activity
GO:0005488Fbinding
GO:0005623Ccell
GO:0005737Ccytoplasm
GO:0006082Porganic acid metabolic process
GO:0006520Pcellular amino acid metabolic process
GO:0006525Parginine metabolic process
GO:0006527Parginine catabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0006873Pcellular ion homeostasis
GO:0006885Pregulation of pH
GO:0008144Fdrug binding
GO:0008150Pbiological_process
GO:0008792Farginine decarboxylase activity
GO:0009056Pcatabolic process
GO:0009063Pcellular amino acid catabolic process
GO:0009064Pglutamine family amino acid metabolic process
GO:0009065Pglutamine family amino acid catabolic process
GO:0009987Pcellular process
GO:0016054Porganic acid catabolic process
GO:0016829Flyase activity
GO:0016830Fcarbon-carbon lyase activity
GO:0016831Fcarboxy-lyase activity
GO:0019725Pcellular homeostasis
GO:0019752Pcarboxylic acid metabolic process
GO:0019842Fvitamin binding
GO:0030003Pcellular cation homeostasis
GO:0030004Pcellular monovalent inorganic cation homeostasis
GO:0030170Fpyridoxal phosphate binding
GO:0030641Pregulation of cellular pH
GO:0036094Fsmall molecule binding
GO:0042592Phomeostatic process
GO:0043167Fion binding
GO:0043168Fanion binding
GO:0043436Poxoacid metabolic process
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044248Pcellular catabolic process
GO:0044281Psmall molecule metabolic process
GO:0044282Psmall molecule catabolic process
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0045852PpH elevation
GO:0046395Pcarboxylic acid catabolic process
GO:0050801Pion homeostasis
GO:0048037Fcofactor binding
GO:0048878Pchemical homeostasis
GO:0050662Fcoenzyme binding
GO:0051453Pregulation of intracellular pH
GO:0051454Pintracellular pH elevation
GO:0055067Pmonovalent inorganic cation homeostasis
GO:0055080Pcation homeostasis
GO:0055082Pcellular chemical homeostasis
GO:0065007Pbiological regulation
GO:0065008Pregulation of biological quality
GO:0070279Fvitamin B6 binding
GO:0071704Porganic substance metabolic process
GO:0097159Forganic cyclic compound binding
GO:0098771Pinorganic ion homeostasis
GO:1901363Fheterocyclic compound binding
GO:1901564Porganonitrogen compound metabolic process
GO:1901565Porganonitrogen compound catabolic process
GO:1901575Porganic substance catabolic process
GO:1901605Palpha-amino acid metabolic process
GO:1901606Palpha-amino acid catabolic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K01584adiA; arginine decarboxylaseEC:4.1.1.19 Arginine and proline metabolismko00330

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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