Gene | Chr | Start | End | Strand |
---|---|---|---|---|
g64607 | Scaffold_33286:HRSCAF_315486 | 3900 | 11139 | - |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | WP_077793822.1 | 0.0e+00 | arginine decarboxylase |
Swissprot | P28629.1 | 0.0e+00 | Biodegradative arginine decarboxylase |
trEMBL | A0A2D0E5N8 | 0.0e+00 | Arginine decarboxylase |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT3G03720.1 | 26.74 | 3e-17 | 89.0 | CAT4 | cationic amino acid transporter 4 |
Species | Genes |
---|---|
- | - |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF03709.12 | OKR_DC_1_N | Domain | 18 | 134 | 86.1 | 1.7e-24 |
PF01276.17 | OKR_DC_1 | Domain | 140 | 590 | 649.7 | 1.5e-195 |
PF03711.12 | OKR_DC_1_C | Domain | 615 | 743 | 147.3 | 2.7e-43 |
PF13520.3 | AA_permease_2 | Family | 909 | 1300 | 167.3 | 4.6e-49 |
PF08019.9 | DUF1705 | Domain | 1330 | 1480 | 144.7 | 1.8e-42 |
PF00884.20 | Sulfatase | Family | 1509 | 1767 | 166.7 | 7.2e-49 |
PF00072.21 | Response_reg | Domain | 1767 | 1867 | 71.0 | 7.5e-20 |
PF00486.25 | Trans_reg_C | Domain | 1899 | 1970 | 68.4 | 3.9e-19 |
Accession | Ontology | Name |
---|---|---|
GO:0005622 | C | intracellular |
GO:0005575 | C | cellular_component |
GO:0008152 | P | metabolic process |
GO:0003674 | F | molecular_function |
GO:0003824 | F | catalytic activity |
GO:0005488 | F | binding |
GO:0005623 | C | cell |
GO:0005737 | C | cytoplasm |
GO:0006082 | P | organic acid metabolic process |
GO:0006520 | P | cellular amino acid metabolic process |
GO:0006525 | P | arginine metabolic process |
GO:0006527 | P | arginine catabolic process |
GO:0006807 | P | nitrogen compound metabolic process |
GO:0006873 | P | cellular ion homeostasis |
GO:0006885 | P | regulation of pH |
GO:0008144 | F | drug binding |
GO:0008150 | P | biological_process |
GO:0008792 | F | arginine decarboxylase activity |
GO:0009056 | P | catabolic process |
GO:0009063 | P | cellular amino acid catabolic process |
GO:0009064 | P | glutamine family amino acid metabolic process |
GO:0009065 | P | glutamine family amino acid catabolic process |
GO:0009987 | P | cellular process |
GO:0016054 | P | organic acid catabolic process |
GO:0016829 | F | lyase activity |
GO:0016830 | F | carbon-carbon lyase activity |
GO:0016831 | F | carboxy-lyase activity |
GO:0019725 | P | cellular homeostasis |
GO:0019752 | P | carboxylic acid metabolic process |
GO:0019842 | F | vitamin binding |
GO:0030003 | P | cellular cation homeostasis |
GO:0030004 | P | cellular monovalent inorganic cation homeostasis |
GO:0030170 | F | pyridoxal phosphate binding |
GO:0030641 | P | regulation of cellular pH |
GO:0036094 | F | small molecule binding |
GO:0042592 | P | homeostatic process |
GO:0043167 | F | ion binding |
GO:0043168 | F | anion binding |
GO:0043436 | P | oxoacid metabolic process |
GO:0044237 | P | cellular metabolic process |
GO:0044238 | P | primary metabolic process |
GO:0044248 | P | cellular catabolic process |
GO:0044281 | P | small molecule metabolic process |
GO:0044282 | P | small molecule catabolic process |
GO:0044424 | C | intracellular part |
GO:0044464 | C | cell part |
GO:0045852 | P | pH elevation |
GO:0046395 | P | carboxylic acid catabolic process |
GO:0050801 | P | ion homeostasis |
GO:0048037 | F | cofactor binding |
GO:0048878 | P | chemical homeostasis |
GO:0050662 | F | coenzyme binding |
GO:0051453 | P | regulation of intracellular pH |
GO:0051454 | P | intracellular pH elevation |
GO:0055067 | P | monovalent inorganic cation homeostasis |
GO:0055080 | P | cation homeostasis |
GO:0055082 | P | cellular chemical homeostasis |
GO:0065007 | P | biological regulation |
GO:0065008 | P | regulation of biological quality |
GO:0070279 | F | vitamin B6 binding |
GO:0071704 | P | organic substance metabolic process |
GO:0097159 | F | organic cyclic compound binding |
GO:0098771 | P | inorganic ion homeostasis |
GO:1901363 | F | heterocyclic compound binding |
GO:1901564 | P | organonitrogen compound metabolic process |
GO:1901565 | P | organonitrogen compound catabolic process |
GO:1901575 | P | organic substance catabolic process |
GO:1901605 | P | alpha-amino acid metabolic process |
GO:1901606 | P | alpha-amino acid catabolic process |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
K01584 | adiA; arginine decarboxylase | EC:4.1.1.19 | Arginine and proline metabolism | ko00330 |