result

Gene information

Detail information of g65674

Location

Gene	Chr	Start	End	Strand
g65674	Scaffold_33428:HRSCAF_319089	3829	5882	+

Sequences

CDS

>g65674.t1
ATGTTTTATTTGCTGGCAATACTATGTACGGCGTATTACTCGCGTTTCTTGGTGGCGGTTTTTGCCGCGATATTGGCATTTTTATGCATCAATTATTTTTTTATAGATCCGCAATATACGCTGCGAATCGCGAGCTTTCAGTCATGGTTATTGCTGGTGATTTTTTTAATCGTGTCGTTTGTGGTGAGCACATCCATTCAGCAACTAAAAGATGCGAAATATAAGGCTGAGATATCGGCGCAACAAGCACAGTTTTTTCAGCAGTTGGCAGAATCGTTTGCGCTACTTAACGATTCGCAGGCGCTGTTAACGCAGGGTTGTCGGCAAATTAGCAAAAAATTAGCTTGCAAAGTAGCGGTGGCGCAACTGGAGCCAGCCGCAGGATTTACCTTAATCGGCCAAAGCCATACCGACTTAATGCCATTACATGAACCCAGTTTACGTTGGGTGTTGGCGTACTCGCGTATGATTGGTGTCGGCACTAACGATTGGTCGCAGCTTAATCAATGGATTATGCCGTTTGGCCGATTTCAAACTCCAGCATGCGTGCTGGTAATTGACCAGCCATTGCAAGGTGCAACGCCGCTAGATGCTATGTTTGTAAATTTGATCTGCCACCAGTTTGCAAGTGCTTACTATAAAAGCCTGAACCAAGAGCAGGCGAACCAATCCGAAATGCGCGCGCAAGCAGAAGCCACTAAAAAAACTTGGCTCGCTGCTTTATCGCACGATATGCGCACACCGTTAACGACTATTTTGGGCTCGGCTAACGCGTTAACTGATAGCGCGATTGAGCTAGATGCCGCGCAAAAGCACAACCTAGTGCAATCGATCAAAACAGAATCCGCTTTTTTAATGAAAGCTACTGAAAATATTTTGGCTTTGGTTAAATTGCATAACCGCGCAACACAGCCATTAACGATGGATTGGCAATTACCTGAAGAGATTATTGGGGCGGTGGTGAGCCGTTATCAAGCCAGAGTCGATACCAAACCAATTAACGTTGAGTTGCAAGACACTGACCAGTTTATTAAGGCCGATGCCCTCTTGTTGGCGCAGGCTTTGTCTAATTTGCTAGATAACGCTAATAAATGGCACCAAGGGGTGCGGCCAATTGAGATTCGGCTTTACGCGGCAGATGGCTACATGATTATCGCCGTTAACAATGCCGGTAAGGGCTTTTCTGCTGACTTTACAATAGCCCCTTTTCAACAGCCAAACACACAGCAGCAAACCGGTCGCGGTTTTGGTTTGGGGCTCATGATTGTGCAAGAGATTATGGCAGCCCACCAAGGGCGGCTAGATTGGCAATCAGACTCCATACAGGGGACTAGCGTGCGCCTTCATTTACCCATCACCACTTTGGATGCTCTTAGTGCAAACGGGTTTCAGGTTAAGCATGCGTCAACCTTGCAACAGGCCCAAGCGCATTTAGCGGCAGAAACCTTTCAACTGGTGATTCTCGATTTGGGCTTACCCGACGGCAGCGGCGAGACGTTAATCACGCAGATTCGCCAAGTATCTGATGCGCCTGTTTTAGTGCTGTCAGCTCGGCAAGATGAGTCGGATAAGGTCAATTGCTTGAATCTAGGCGCGGATGATTACCTGATTAAGCCTTTTGGTGTAGACGAGTTGGTAGCACGCTTAAGAGCTGCGTTGCGGCGCTCGGCCATGATGGCCATGCGCGACCATGTTTACCAATACCAATCGCTGGTGATTAATCGTGCCAGCGGTATCGTTAATAAAAATGAGGTGCAAATCCATCTAAGCCCGATTGAGCACCAGTTAATCATGCTATTGGCTACAAAACCAGCGAGTATTTTCACCCATCGCCAGCTATTAACGGCGGTTTGGGGGCAAGCTTATGTGAGCGAGACCCATTATTTGCGCATACACATTGGCAGGCTACGCGCAAAAATTGAAGATACACCCGCCGCACCGCAATATATTTTAACCGAGCTGGGGATTGGTTATCGCTTAGCTTAA

Protein

Gene

>g65674.t1
ATGTTTTATTTGCTGGCAATACTATGTACGGCGTATTACTCGCGTTTCTTGGTGGCGGTTTTTGCCGCGATATTGGCATTTTTATGCATCAATTATTTTTTTATAGATCCGCAATATACGCTGCGAATCGCGAGCTTTCAGTCATGGTTATTGCTGGTGATTTTTTTAATCGTGTCGTTTGTGGTGAGCACATCCATTCAGCAACTAAAAGATGCGAAATATAAGGCTGAGATATCGGCGCAACAAGCACAGTTTTTTCAGCAGTTGGCAGAATCGTTTGCGCTACTTAACGATTCGCAGGCGCTGTTAACGCAGGGTTGTCGGCAAATTAGCAAAAAATTAGCTTGCAAAGTAGCGGTGGCGCAACTGGAGCCAGCCGCAGGATTTACCTTAATCGGCCAAAGCCATACCGACTTAATGCCATTACATGAACCCAGTTTACGTTGGGTGTTGGCGTACTCGCGTATGATTGGTGTCGGCACTAACGATTGGTCGCAGCTTAATCAATGGATTATGCCGTTTGGCCGATTTCAAACTCCAGCATGCGTGCTGGTAATTGACCAGCCATTGCAAGGTGCAACGCCGCTAGATGCTATGTTTGTAAATTTGATCTGCCACCAGTTTGCAAGTGCTTACTATAAAAGCCTGAACCAAGAGCAGGCGAACCAATCCGAAATGCGCGCGCAAGCAGAAGCCACTAAAAAAACTTGGCTCGCTGCTTTATCGCACGATATGCGCACACCGTTAACGACTATTTTGGGCTCGGCTAACGCGTTAACTGATAGCGCGATTGAGCTAGATGCCGCGCAAAAGCACAACCTAGTGCAATCGATCAAAACAGAATCCGCTTTTTTAATGAAAGCTACTGAAAATATTTTGGCTTTGGTTAAATTGCATAACCGCGCAACACAGCCATTAACGATGGATTGGCAATTACCTGAAGAGATTATTGGGGCGGTGGTGAGCCGTTATCAAGCCAGAGTCGATACCAAACCAATTAACGTTGAGTTGCAAGACACTGACCAGTTTATTAAGGCCGATGCCCTCTTGTTGGCGCAGGCTTTGTCTAATTTGCTAGATAACGCTAATAAATGGCACCAAGGGGTGCGGCCAATTGAGATTCGGCTTTACGCGGCAGATGGCTACATGATTATCGCCGTTAACAATGCCGGTAAGGGCTTTTCTGCTGACTTTACAATAGCCCCTTTTCAACAGCCAAACACACAGCAGCAAACCGGTCGCGGTTTTGGTTTGGGGCTCATGATTGTGCAAGAGATTATGGCAGCCCACCAAGGGCGGCTAGATTGGCAATCAGACTCCATACAGGGGACTAGCGTGCGCCTTCATTTACCCATCACCACTTTGGATGCGTCGCGATGAAACCAACCCTACTTTTGGTAGAAGACGATCGTCATATCGTTCATTTTTTAATCCCCAGTCTTAGTGCAAACGGGTTTCAGGTTAAGCATGCGTCAACCTTGCAACAGGCCCAAGCGCATTTAGCGGCAGAAACCTTTCAACTGGTGATTCTCGATTTGGGCTTACCCGACGGCAGCGGCGAGACGTTAATCACGCAGATTCGCCAAGTATCTGATGCGCCTGTTTTAGTGCTGTCAGCTCGGCAAGATGAGTCGGATAAGGTCAATTGCTTGAATCTAGGCGCGGATGATTACCTGATTAAGCCTTTTGGTGTAGACGAGTTGGTAGCACGCTTAAGAGCTGCGTTGCGGCGCTCGGCCATGATGGCCATGCGCGACCATGTTTACCAATACCAATCGCTGGTGATTAATCGTGCCAGCGGTATCGTTAATAAAAATGAGGTGCAAATCCATCTAAGCCCGATTGAGCACCAGTTAATCATGCTATTGGCTACAAAACCAGCGAGTATTTTCACCCATCGCCAGCTATTAACGGCGGTTTGGGGGCAAGCTTATGTGAGCGAGACCCATTATTTGCGCATACACATTGGCAGGCTACGCGCAAAAATTGAAGATACACCCGCCGCACCGCAATATATTTTAACCGAGCTGGGGATTGGTTATCGCTTAGCTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	WP_055867163.1	1.1e-83	DUF4118 domain-containing protein
Swissprot	P21866.3	1.3e-47	KDP operon transcriptional regulatory protein KdpE
trEMBL	A0A0Q6BS01	3.1e-83	histidine kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G31920.1	36.90	9e-06	49.3	ARR10;RR10	response regulator 10

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g65674	AT4G31920.1	84	48	1	467	545	42	125	36.90	9e-06	49.3

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13493.3	DUF4118	Domain	1	76	64.3	6.8e-18
PF00512.22	HisKA	Domain	234	299	35.1	9.1e-09
PF02518.23	HATPase_c	Domain	348	453	50.6	2.2e-13
PF00072.21	Response_reg	Domain	457	549	66.7	1.6e-18
PF00486.25	Trans_reg_C	Domain	586	660	66.9	1.1e-18

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07667	kdpE; two-component system, OmpR family, KDP operon response regulator KdpE	EC:-	Two-component system	ko02020
K07667		EC:-	Quorum sensing	ko02024

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network