result

Gene information

Detail information of g69743


Location
GeneChrStartEndStrand
g69743Scaffold_33978:HRSCAF_331657827552854515+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAGV31154.19.7e-126AGL6-like MADS-box protein
SwissprotQ8LLR1.13.5e-88MADS-box protein 3
trEMBLT2CCV27.0e-126AGL6-like MADS-box protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT2G45650.161.909e-80 293AGL6;RSB1AGAMOUS-like 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag69743.t1
Allium fistulosumAfisC8G05475
Allium sativumAsa1G00367.1
Arabidopsis thalianaAT2G45650.1
Oryza sativaLOC_Os02g45770.1; LOC_Os04g49150.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00319.15SRF-TFDomain105792.76.2e-27
PF01486.14K-boxFamily83170109.56.1e-32

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005515Fprotein binding
GO:0003002Pregionalization
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0005488Fbinding
GO:0006355Pregulation of transcription, DNA-templated
GO:0040007Pgrowth
GO:0046983Fprotein dimerization activity
GO:0007275Pmulticellular organism development
GO:0009653Panatomical structure morphogenesis
GO:0007389Ppattern specification process
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0009553Pembryo sac development
GO:0009791Ppost-embryonic development
GO:0009889Pregulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0009908Pflower development
GO:0010016Pshoot system morphogenesis
GO:0010022Pmeristem determinacy
GO:0010073Pmeristem maintenance
GO:0010093Pspecification of floral organ identity
GO:0010094Pspecification of carpel identity
GO:0010154Pfruit development
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010582Pfloral meristem determinacy
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010628Ppositive regulation of gene expression
GO:0048646Panatomical structure formation involved in morphogenesis
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0022414Preproductive process
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0035670Pplant-type ovary development
GO:0048229Pgametophyte development
GO:0048316Pseed development
GO:0048367Pshoot system development
GO:0048437Pfloral organ development
GO:0048438Pfloral whorl development
GO:0048439Pflower morphogenesis
GO:0048440Pcarpel development
GO:0048443Pstamen development
GO:0048444Pfloral organ morphogenesis
GO:0048445Pcarpel morphogenesis
GO:0048448Pstamen morphogenesis
GO:0048449Pfloral organ formation
GO:0048455Pstamen formation
GO:0048457Pfloral whorl morphogenesis
GO:0048459Pfloral whorl structural organization
GO:0048461Pflower structural organization
GO:0048462Pcarpel formation
GO:0048466Pandroecium development
GO:0048467Pgynoecium development
GO:0048481Pplant ovule development
GO:0048507Pmeristem development
GO:0048509Pregulation of meristem development
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048532Panatomical structure arrangement
GO:0048589Pdevelopmental growth
GO:0048608Preproductive structure development
GO:0048731Psystem development
GO:0048827Pphyllome development
GO:0048832Pspecification of organ number
GO:0048833Pspecification of floral organ number
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051254Ppositive regulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0080060Pintegument development
GO:0080090Pregulation of primary metabolic process
GO:0080112Pseed growth
GO:0090567Preproductive shoot system development
GO:0097159Forganic cyclic compound binding
GO:0099402Pplant organ development
GO:1901363Fheterocyclic compound binding
GO:1902680Ppositive regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0090696
GO:0090697
GO:0090698
GO:0090701
GO:1905392
GO:1905393

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09264K09264; MADS-box transcription factor, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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