result

Gene information

Detail information of g70001

Location

Gene	Chr	Start	End	Strand
g70001	Scaffold_34023:HRSCAF_332634	1	1858	-

Sequences

CDS

>g70001.t1
ATGCTAAAAGAAAAGCCCCAGGATGAACGTGAATTTGAATTTACGGCCAGTGATTTTGCAAAAGTACGTAAACTGATTTACCAACATGCTGGGATTTCTTTATCAGAAGCCAAAACCGATATGGTGTATAGCCGGATTGGCCGCCGATTAAGGCTGGTCGGTCACGACTCATTTAAAACGTATTTAGATGCCCTCGAGCAAGCACAAGACCCGGACGAGTGGCAAGCATTTACCAATGCCTTAACCACAAACTTAACCTCATTTTTTCGAGAAGAACATCATTTTCCTGTTCTTGCGACGCATTTATTAAGCCTGCAAAAACCGATTCGCATCTGGTGTTCGGCAGCCTCAACAGGCGAGGAACCTTATTCCATTGCGATGACAGCGTGTGAAGCTTTTAAGAGCATGCGCCCGCCCGTTGAAATCATCGCTACCGATATCGATACCAACGTTTTAAGCGTCGCGGCCAAAGGCGTTTATCCTGAAGAGCGCGTAAGCAAACTTTCTGAGCAACGCCGCAAGGCTTTTTTCCAAAAAGGCAAGGGCCAGTACGCAGGCCAAGTCAGGGTAAAAAATGAACTGCGCAGTTTGGTCACTTTTAGCCAACTGAATCTATTGGAAGAAAAATGGCCGTTAAAAGATGCAGTAGATGTGATTTTCTGCCGCAATGTCATGATTTACTTTGATAAGCCGACACAATCAAAAATATTGAGCCGTTTCGCGCCGTTAATGAAACCTAACGCGTTATTATTTGCGGGGCATTCAGAAAACTTCTTATACGTTTCTAATGCATTTCAATTATTAGGCAAGACGCTCCATGAAGCCATGGCGACCACGCTCTATTATGATCGCACGTTTAATAGCGAAGCCGCCAAAATTGCCCCTGGTGAATATTATTTCACCAATCAGAACATGTTAATCGTCACCGTATTAGGGTCTTGTGTGTCCGCTTGTATTCGAGATACCGTTTCCGGTATTGGCGGCATGAACCATTTTATGTTGCCAGAAAGCGCTAAAGCCGATAAAGATAATCCCGTTTCAGAGTCCATGCGCTACGGCACTTATGCGATGGAGGTGCTCATCAACCAATTGCTGCGTAATGGTGCCAGACGCGAAAACTTAGAAGCTAAAATTTTTGGCGGTGGCAATGTGTTAAGAAGCTTTACCACCAATAATGTGGGCGATCGCAACGCGCTTTTTGTGAAGCAATATTTAAAAGATGAAAATATCCGCGTCACCGGTGAAGACCTGCAAGATATTTACCCCAGAAAAGTATATTTTTTCCCTAAGACAGGCAAAGTCTTGGTCAAAAAACTCAAACAATTAAATAACTACACCTTGGTGCAACGTGAGCAAGCCTACTTTAGTAAGCTTAAAGCGAATGATGTCAGTGCCTTAATCAGAAGTTTGTTAACTGAAATGATTAATCAGCAAGCCGATATGCAAGTGGTTGGCGCAGCACCTGACCCGCTCATTGCGCGTGAGATGATTAAGCAGCTAAACCCAGACGTATTAACGCTGGATGTCGAAATGCCCAAAATGGACGGTTTGGATTTTTTAGAAAAACTGATGCGCTTGCGGCCCATGCCGGTTGTCATGGTTTCTACGCTAACCGAACGTGGTTCAGAGATTACCATGCGCGCCCTGGAATTAGGCGCAACCGATTTTGTGACCAAACCAAAAACCTCGATTGCCGAAGGCATGCGCGA

Protein

Gene

>g70001.t1
ATGCTAAAAGAAAAGCCCCAGGATGAACGTGAATTTGAATTTACGGCCAGTGATTTTGCAAAAGTACGTAAACTGATTTACCAACATGCTGGGATTTCTTTATCAGAAGCCAAAACCGATATGGTGTATAGCCGGATTGGCCGCCGATTAAGGCTGGTCGGTCACGACTCATTTAAAACGTATTTAGATGCCCTCGAGCAAGCACAAGACCCGGACGAGTGGCAAGCATTTACCAATGCCTTAACCACAAACTTAACCTCATTTTTTCGAGAAGAACATCATTTTCCTGTTCTTGCGACGCATTTATTAAGCCTGCAAAAACCGATTCGCATCTGGTGTTCGGCAGCCTCAACAGGCGAGGAACCTTATTCCATTGCGATGACAGCGTGTGAAGCTTTTAAGAGCATGCGCCCGCCCGTTGAAATCATCGCTACCGATATCGATACCAACGTTTTAAGCGTCGCGGCCAAAGGCGTTTATCCTGAAGAGCGCGTAAGCAAACTTTCTGAGCAACGCCGCAAGGCTTTTTTCCAAAAAGGCAAGGGCCAGTACGCAGGCCAAGTCAGGGTAAAAAATGAACTGCGCAGTTTGGTCACTTTTAGCCAACTGAATCTATTGGAAGAAAAATGGCCGTTAAAAGATGCAGTAGATGTGATTTTCTGCCGCAATGTCATGATTTACTTTGATAAGCCGACACAATCAAAAATATTGAGCCGTTTCGCGCCGTTAATGAAACCTAACGCGTTATTATTTGCGGGGCATTCAGAAAACTTCTTATACGTTTCTAATGCATTTCAATTATTAGGCAAGACGGTTTATCAATTAAAACAATCGCTTAATCACAAAAAACCCAATCAAGCAAATAGCGGAGCCGCGGCATGAGTCAGCTCCATGAAGCCATGGCGACCACGCTCTATTATGATCGCACGTTTAATAGCGAAGCCGCCAAAATTGCCCCTGGTGAATATTATTTCACCAATCAGAACATGTTAATCGTCACCGTATTAGGGTCTTGTGTGTCCGCTTGTATTCGAGATACCGTTTCCGGTATTGGCGGCATGAACCATTTTATGTTGCCAGAAAGCGCTAAAGCCGATAAAGATAATCCCGTTTCAGAGTCCATGCGCTACGGCACTTATGCGATGGAGGTGCTCATCAACCAATTGCTGCGTAATGGTGCCAGACGCGAAAACTTAGAAGCTAAAATTTTTGGCGGTGGCAATGTGTTAAGAAGCTTTACCACCAATAATGTGGGCGATCGCAACGCGCTTTTTGTGAAGCAATATTTAAAAGATGAAAATATCCGCGTCACCGGTGAAGACCTGCAAGATATTTACCCCAGAAAAGTATATTTTTTCCCTAAGACAGGCAAAGTCTTGGTCAAAAAACTCAAACAATTAAATAACTACACCTTGGTGCAACGTGAGCAAGCCTACTTTAGTAAGCTTAAAGCGAATGATGTCAGTGGTGATATCGATTTATTTTAGCGAATTAAAGAGACGAAAAACATGACCATTAAAGTGCTCGTGATTGATGATTCAGCCTTAATCAGAAGTTTGTTAACTGAAATGATTAATCAGCAAGCCGATATGCAAGTGGTTGGCGCAGCACCTGACCCGCTCATTGCGCGTGAGATGATTAAGCAGCTAAACCCAGACGTATTAACGCTGGATGTCGAAATGCCCAAAATGGACGGTTTGGATTTTTTAGAAAAACTGATGCGCTTGCGGCCCATGCCGGTTGTCATGGTTTCTACGCTAACCGAACGTGGTTCAGAGATTACCATGCGCGCCCTGGAATTAGGCGCAACCGATTTTGTGACCAAACCAAAAACCTCGATTGCCGAAGGCATGCGCGA

Functional annotation

Database	accession number	e-value	annotation
nr	WP_020182146.1	2.1e-126	MULTISPECIES: chemotaxis protein CheR
Swissprot	Q1GZY9.1	4.4e-81	Probable chemoreceptor glutamine deamidase CheD
trEMBL	Y0KHV1	1.5e-126	Chemotaxis protein methyltransferase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
-	-	-	-	-	-

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
-	-	-	-	-	-	-	-	-	-	-	-

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03705.12	CheR_N	Domain	18	67	57.2	9.1e-16
PF01739.15	CheR	Domain	84	269	196.0	4.1e-58
PF03975.10	CheD	Family	333	438	116.8	4.3e-34
PF00072.21	Response_reg	Domain	465	560	74.8	5.1e-21

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00575	cheR; chemotaxis protein methyltransferase CheR	EC:2.1.1.80	Two-component system	ko02020
K00575	cheR; chemotaxis protein methyltransferase CheR	EC:2.1.1.80	Bacterial chemotaxis	ko02030

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network