result

Gene information

Detail information of g71650


Location
GeneChrStartEndStrand
g71650CHR2278185441278189646+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020243040.13.9e-83B3 domain-containing protein LFL1-like
SwissprotA4LBC0.14.8e-38LEC2 and FUSCA3-like protein 1
trEMBLA0A426ZYL32.2e-59TF-B3 domain-containing protein (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G26790.147.652e-37 152FUS3AP2/B3-like transcriptional factor family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag71650.t1
Allium fistulosumAfisC2G02650; AfisC7G03793
Allium sativumAsa5G03325.1
Arabidopsis thalianaAT3G26790.1
Oryza sativaLOC_Os01g51610.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family8517953.51.6e-14

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001067Fregulatory region nucleic acid binding
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0007275Pmulticellular organism development
GO:0009790Pembryo development
GO:0008150Pbiological_process
GO:0008284Ppositive regulation of cell proliferation
GO:0009314Presponse to radiation
GO:0009416Presponse to light stimulus
GO:0009628Presponse to abiotic stimulus
GO:0009648Pphotoperiodism
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009733Presponse to auxin
GO:0009791Ppost-embryonic development
GO:0009793Pembryo development ending in seed dormancy
GO:0009889Pregulation of biosynthetic process
GO:0009890Pnegative regulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0009893Ppositive regulation of metabolic process
GO:0010033Presponse to organic substance
GO:0010115Pregulation of abscisic acid biosynthetic process
GO:0010116Ppositive regulation of abscisic acid biosynthetic process
GO:0010154Pfruit development
GO:0010228Pvegetative to reproductive phase transition of meristem
GO:0010262Psomatic embryogenesis
GO:0010371Pregulation of gibberellin biosynthetic process
GO:0010373Pnegative regulation of gibberellin biosynthetic process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010565Pregulation of cellular ketone metabolic process
GO:0010817Pregulation of hormone levels
GO:0044212Ftranscription regulatory region DNA binding
GO:0046889Ppositive regulation of lipid biosynthetic process
GO:0019216Pregulation of lipid metabolic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0019747Pregulation of isoprenoid metabolic process
GO:0022414Preproductive process
GO:0031323Pregulation of cellular metabolic process
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031327Pnegative regulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0032350Pregulation of hormone metabolic process
GO:0032351Pnegative regulation of hormone metabolic process
GO:0032353Pnegative regulation of hormone biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0042127Pregulation of cell proliferation
GO:0042221Presponse to chemical
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043455Pregulation of secondary metabolic process
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0045827Pnegative regulation of isoprenoid metabolic process
GO:0045828Ppositive regulation of isoprenoid metabolic process
GO:0045833Pnegative regulation of lipid metabolic process
GO:0045834Ppositive regulation of lipid metabolic process
GO:0046885Pregulation of hormone biosynthetic process
GO:0046890Pregulation of lipid biosynthetic process
GO:0048316Pseed development
GO:0048518Ppositive regulation of biological process
GO:0048519Pnegative regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048523Pnegative regulation of cellular process
GO:0048573Pphotoperiodism, flowering
GO:0048608Preproductive structure development
GO:0048731Psystem development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051055Pnegative regulation of lipid biosynthetic process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0065008Pregulation of biological quality
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:1901363Fheterocyclic compound binding
GO:1902930Pregulation of alcohol biosynthetic process
GO:1902932Ppositive regulation of alcohol biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0062012
GO:0062013
GO:0062014
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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