result

Gene information

Detail information of g74103

Location

Gene	Chr	Start	End	Strand
g74103	Scaffold_34550:HRSCAF_343834	41790	44171	+

Sequences

CDS

>g74103.t1
ATGGCGGCTTCTTCTTCCTCCTCTTCTTCTTCAACATCAATTATCCACGTAATCTTATTTCTCTCCTCTCTTCATGCCATGTTTGCACAAAAACCCAACGACATATCCTCCTTCACAATCCAAGACTCCCCATGGTTACCCACCCAGACCAAAACCCTCCTCTCCCCAAACCAAACATTCGCAGCCGGATTCCGAAAAGCCCTCAACGCCGCCTCCTACACTTTCTCAATCTGGTTCCAAAAGTCCAGGGACAAAACCGTAATCTGGTCCCTTAAGCAACCAGTCCCACCTTCCTCTCCCCTCACAATATTTCCCAATGGCACCCTCTTCCTCCCGGGCCCGCCCGGTGGGCCCGTAAACCTCTTCCCTGACACTGCACGTGCACCGTCCAACCCGACTCTCTTCATCTCCGAAAGCGGGGAGCTTACCTTCGGAAAATGGTCCAGTTTCGACTCACCCACCCACACCCTCCTACCCAACCAACCCATCATCCCCACCCACACCCTCCTCTCCTCAAACAGTAAGTACACACTAGTCAACGCTTCCGTACTAATGTTCAACGGAACGGAACCGTACTGGTCCGTGAACGTCTCTCCAAATCCCACTTCCTTCACCAATCTAACAACCGACGGCTTTCTGCGCGAAGCCGATTCGATGGCTTACCTAATGTCCGACGTCGGCAATAGCAACATCTCCCGGCGACTAACCCTCGACCCGGATGGCAACATCCGGGTTTACAGCTTGAACGATACCTCCGGCGCATGGAAAGTCGTCTGGCAAGCAGTCATCGAGCAGTGCACGATAAAGGGAATCTGCAGGGACAACTCGGTTTGCGTTCCTAGCGGAAACGGAAACGCTACGACTTGCGTTTGCCTGCCCGGTTATAACGTCAATCAGGTTAACGGATGCGATATAAAGAAGAAAATTTCGAATGGAGGTAAGTTTTTGAGGCTTGACTACGTGGTGTTCGGCAGCGATGCGGCGTATGTGAACAACACGGAGTATGTGGAGTATATTCCGATCAACTTCGACGATTGTCGATCGAGGTGTGTGGAAAGTACAAGTTGTGTGGGGTTTACGTACACGTTTAATGGGAAGCGCGATTGCTTTAATTGGTTTAAGGTGTTGAGGTATGGGTATTGGTCGCCCGGTAGCGAGAAGTCGACCTTTGTGAAGGTGGATTCGTCGGAGACGGACATTTCTGGTTTCACCGGTATGACTTCGATGATCGACACGACGTGTCCAGTTAAGATAAGCCTGCCAGTGCCCGAACGTGACTCCAAGACGACCGCTAGGAACCTAGCGATCATTGGGACGTTGTTCGCTTTGGAGTTGACGGTGGGGATTTTGTCGTTTTGGGCATTTCTAAGGAGGTACTCAAAGTACCGGGACATGGCACGGACGTTCGGGCTCGAGTTCCTACCGGCCGGGGGACCAAAGCGGTTTTCGTATGCCGAGTTGAAAGTCGCGACAAACGATTTCTCTAACGTGGTAGGGAGAGGAGGGTTTGGAATCGTGTATAGGGGAGAGCTTCACGATGGACGGATCATAGCGGTTAAGAAACTGAAGAACGTGGTGGGGGTAGCGGAAGCAGAGTTCTGGGGCGAGGTCACGATCATCGCGAGGATGCATCATTTGAACCTCGTGAGAATGTGGGGGTTTTGCGCAGAGAAGGAGCAACGGATGCTGGTTTACGAGTACATACCTAACGGGTCCTTGGATAAGTTTCTTTTTCACGATGAATCGGGGAAGGACGTGAAGTTGGATTGGGGGATAAGGTACAGGATCACACTCGGAGTAGCGCGTGCGATCGCGTATTTGCACGAAGAGTGTCTTGAGTGGGTCCTACATTGTGATATTAAGCCGGAGAATATTCTTCTAGAGGATGACTTCTGCCCTAAAGTGTCGGACTTTGGGCTATCGAAACTTACAAACAAGAAGGACATAGTGACTATGTCCAGGATGCGTGGGACACGTGGGTATATGGCTCCGGAATGGGTGACGCATAGGGAGCCTATAACGGCCAAGGCCGATGTGTACAGTTTTGGGGTGGTGCTTTTGGAAATTGTTACGGGTACAAGGAGCAGCGAATTTCAGAGGTCTTCAGTGGATAGCGAGGATTGGTACTTCCCGAGATGGGCGTATGAGAAGGTATATGTAGAGAAGCGGGTCGAGGACATGCTAGACCCGATAATTCTGGAGAGTTACGATAATAGGGAGCATTTCCCTATGGTTGAAAGAATGGTTAAAACTGCAATGTGGTGTTTGCAGGATAAAGCTGAAACAAGGCCATCTATGGGGAAAGTGGCGAAAATGCTTGAAGGGTCCGTGGAAATTACTGAACCAGGAAAGCCTTCTATTTTTTACCTTGGAAATGAATGA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020258564.1	7.5e-276	LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
Swissprot	Q9FLV4.1	4.5e-100	G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080
trEMBL	A0A444F0S5	1.3e-269	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34300.1	34.75	3e-96	350		lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g74103	AT1G34300.1	777	409	30	55	785	44	768	34.75	3e-96	350
g74103	AT4G32300.1	778	422	30	53	782	48	773	32.90	6e-84	309
g74103	AT5G24080.1	359	174	8	436	786	77	413	43.18	8e-82	301

Ortholog group

Species	Genes
Allium cepa	g288714.t1; g74102.t1; g74103.t1
Allium fistulosum	AfisC5G03618
Allium sativum	Asa4G03540.1
Arabidopsis thaliana
Oryza sativa	LOC_Os10g01100.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00954.17	S_locus_glycop	Domain	208	297	34.9	1.6e-08
PF08276.8	PAN_2	Domain	339	375	22.4	8.5e-05
PF00069.22	Pkinase	Domain	496	769	158.4	1.9e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0005516	F	calmodulin binding
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network