result

Gene information

Detail information of g75443

Location

Gene	Chr	Start	End	Strand
g75443	CHR8	43126881	43133292	+

Sequences

CDS

Protein

Gene

>g75443.t1
ATGGAGATTTCTAGAGGTGGTTTCATGATTTTTATTGGAGGGGATCGATGTGGAGAATTAACAGATCATTTTTCGATCGATCAGGAAATTCTGGCGATTAGTTGGTTGATAGGGTCAAAGATTATTTCTGAAGGAGGCCAAGACAAGGGAAATACATTGGTGGTGGTCCCATAGTTGCTGATAGATGGAGTTTCCTAAAGTAATCGATAAGTGTTTAAGGATGGATTTTTGGGGTTTAATTTTCACTACCTGGTGACAACAATTGTCAGCATCGAGTTTGTCATGGCTTAGCTTGGGGTGCGGTAGGGTATGGCGAGTTGAACGACAACGAAGTAGATGGTTGGTTATGGGTAAGGAGGCAGCGGTCGTGGTTTGGTGTGTGTATTCAAAAACCCAAATGCGAATGTTGAGGGGAAAGAAAAGGGATGGAATTCATTTGGGATCTCCATAGCGTGTGGGGAGAGCGATAGTGGGTCGAGCTCGATAAGAGAAGTTTGCATGTGGTTTTAGATCGATGAACGAAGGTGGGGATGGTTGATTCACATGCACAACCGTGATATGTGCATGTACAGTAAGTGCAAAATGGATTTGGGGTGATATGGGGATGGATGCACTATTCATAGCGGGTCGGGTTTGGATGGAGTTGGGCTTGGGCCTGAATTTGTGGGTGAGAATTCTTATTTAATTTATTGCAAAATTATTAACTAAATGTGTTGACTTCTAATTGAGATATCATGTTCCTTTTAAATCTGTTTGACCCGTGAATTTTTGCATTAAACTCATATTTTCGAGTACTACACTTTGGCATTGATAATTAATAGTTTTGTTGAAGTATAATTTAGTGATAAAATAAACTGACTGAATATGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAAACACATCTCAAAAGCAAGGGATTATACCGTAACCTGCTCTTCTCCCGTAGCAACAAGTTAGTACACTATCTTTCATTGCACTACATTAGCCCAAAACTACAATAATATAGTATAAATAGACCATGATCAAACCGTTATCCCAAAATAACGATCACTACTACTAAGACCGAGTAGATATGCCATAATGTGTATGGTCACTACTGCTAAGACCAATCGTTCATAAGATTACGAATGTGGGATCCAAAAATGTCCAAGCGATCACAATAAGATAAAGTTATTCAGTATCCCTCTAAGACCGTGTCGAGTGTGTCATGACCATCGACAACACTATAGGTACACCACAACAAGGTCAATACTTGGGTAGGTCACCTGAGTCCCTGGGTAGGTCACATAAGTCCATACGCTTGGTGCGTCACAATAAGTCCACACCAAACAAATCATATATTACTCCAAGGTTGAAATCCTAGAGTACGAACTCACATTGTATGTAATTTATGGAAACGCCATGCACGTCTTCAGTCACCACGGCCAAAAAACCCACCAGAAAACTCTATCAAAACCCTATACTAACCCAAATTGCCTTCAAAATGGAACGTATGCCCTCAATGTCATAATACTCTCCCATTATACCCTTTCGATCTACCTCAAAATCTACGATTTTGAAATACGTGTAGGGATGAATCTTGCATGGGCCCTGAATCAGAGTACTTCAAAATCCACAAAAATTTCAAGAATTGTAACCCTCACAAAGTGGTGAAAAATGGTCCAAATCTTACCTCAATCCGACTTTGTATGCGAAAGTTATCGCGTTTTGAAGTTTGCATAATTCCCAACAGGTCAGTCGATTGAGGTTCCATTCAGTCGACTGTACTAGGGAAGAGATGACCTGGTTCCTCTCGATCAGTCGACTGAAAGGACCTATTCATTCGACTGAACTGACCAGTCGACTGAACTGACAGGTTTTAGGCAATAAGCCTGGGCAAGAGTAGAATCCCCGAACGAACGCCGATTCACACGTCGTTTCATTCGACGCTTCATCCAATATGTCGCCTTGCCACTAGATTCTACCTCCATACCATCGAACATCTACTGGGGTTCATTTGTTGACGTTTTGTAAGTGGCTTCTTAAGTATACGAAAAACTATTTCGATACCAAAATCCACGCTTTTCACGAGTAGAGTTCAACAGAAAATTATAGCGACCCAGCTTCCTCTACAACGTCAAATCGACATACCTAGCCTCTTTGCCTTGTGTATAGCCTATACGTGTGTCAATACACTCATTTGTGCACGCCTTTGCACAAACGAATGCGTAAACACACATCTCAACACTAAACACATTTCGAGCTTTACCGAGGAGATTACTCAACCTGGTACTCTCCCGCACGACTTCGCTTACGCGATAGTCGCTGTGGCTATGTGAAATGCCTGCAACGGACTTATAGTTAATTATATTCCTATGTAATCAAACAATTTCAAACGTATAAAAAAACCAAACACATAACAATTTTAACTATAATACAATATTGGATTTTAATTATCGTTTTGCTCCAAATGCACGTATACGTATACTCACTCGTGCACGTATAAACACACGTAAATCCAGGTGAGCCAATCAACCATTGCTAGATCAAATATTACTTTTACTTACTAATCTTTTCAATAAAAGTAAAGTATCACTTCAGATCATTTTAGGAAATCTCGTAACATTTTATAATATTATACTAACTTATAAATCACTTTATAGCCTTTAAAATACTTATCTATTTCACTAAAAATCGAGTATTCATCATATTTCTCTTTTATAAAATCTTACCTTTTCTTCTAAAATATACAATTCACTTATAAAATCATAAACTCATTTTATTAATACTAATTAAGGCTCATTGGGCCTCCAATCACTTCACACATAAGTTTAGATCCCAAAACACTCTTATTTGGCTTACTAACATTTTATAAACCTCTTAAGCTAGTTTATTCTTACTAACTAATAGCATGCATTTAAATATATCATGTGATTAGTCTCTAATTCATCACAACAACACATATAATCTTTCAATTAACCTAAAATCAACTTTTAAGATTACCAACTTTTCCAAACATGGTGATCAAGGGTTCAAACAATTAGTTAGAAAATATAGTCATGAGCACTACATGAATATACGCCTAATCCATATCATAGAAATTTCCAACCATTCTGTTACTTCACAATCATTCATAAACAAATTAATGAAGCAAAACACTTAGATTGAATAAGAGAATCGTCTCACTCACCTTAATTAAACCCAAGCCAAGATCTAATTACAAAAACTCATCTCTATTCATACCTTAAATATCAAAATCAACATCTATATCCCAAATTGAGCTAATTCCTTCGCGGGTTTTGTAGAGGATGAGTAGAGAGAAATTATGGTTACTTTTATTTGATTTTAGGAAATTTATTTGGGCCTGCATTAAGAGATTTAGGGTAAGGGGATTAAGAAGTAATCAGGGAAAGTGATTAGAGAAGAGGAAGAAATGAAAAATGAAATGAAAGTGGAATGTAGATTAGGAAGAGAGTTAGCCGCTTATAGGCTAAGTAATGGCTTAGCCTTTTCTTCCACTCAAAAATCATTGTTCACTCCAAATTCTTACCGTCTCCAAACATTGTCAAGTTTATACTCATTTTACTTGCGTTGAAAAAACGAACTTAACTACGAGTGTGTTGAGTCCTAATTCGCTCGTTTATAAAAATCGAGTATAAGAATTGTTCCGTCGCTTAACGATTAAATATTTAAATATTCAAACGTTAAAATTACGGGGCATTACATGCTCCGCTCTCTTGAAAACCATTAAACCACGAATAAAAAAATATCATACATCCCATAAATACGGTTCTACAACATGTTGATTGAATGTGTGTCATTTTTTGAATAAACATAATGAAATTTTAACGTTTTTATATATTCGTAAATGCACAAACACCAATTAACAGTTACTAGATTAACGGTTTACCAACGATTATTCACAAAGATGAATGCATGATATCCGTAGTCATTTTTGAATTATCGATCGTATCGGTACGATAATGGTTACTTACCATAACAGTTGTATATATATCGGCGATATGGTAACCATAACGATAAACTAACTTAGTTTACTCGAAAAAACAATACAGTAAAAGTTTTGCAAAATGTTAACGACAAACATTACTGTAATAGAAACTTAAAACGTATTAATGGATGGGCCAAGTAAATTTGCTACTCCAACTATTACGTTATATGTTAGTTTGTATCAATGATATTTATAAGAAATTCAAACGAATACCGATCCAGCAATACACCTAAAATCTTTGGGTAATAAAAAATATTGATCAATTATATTGTATCTTTCGCATCATAAATAAGAATTGGACGGACCTTTTCCAAACCGAGTCATATGCATTCCTAATTAATGGTACATATGGCAGTTTGTATCACCTGTGGGTAGCTCGTAGGTCATTACCCGATAAGTTGTATGAGCCTGTACAGAGAGTATGGATTCCTTTCAGTTATTATAGCAGCGTTGGGATCAAAATAGCCACAGTTTAATATGTTATATTTTTGGAAGTCAGGAGGATAATTGTAATAAATCTTTATTAATACTATAACACAGCTACTACAAATATTTTATCAGCAGACCCTGCAACGTTCTACAATGTCTCAAAATTCAGTGGATAAAGTAAAATATCAAATCGGAACGCTTGATGGGCACCTACTTGGGGTACCCTACAAACCGTAAACAGCAAGCAACAACAGATATACTGGGTAGGGGCACATCCCTCCACACTCGAATATCTACCTTCCCACTCTTCTTCTCCTCTCCCTTTCTTTCTTCTTCTTCTCTCCCTCGAACACAAAAAAAATCTTATCACATCATACATACATCAATCATCCTCACTTTAATGCCAGCATGCAAGATCTCCAGCAAATCCCAGGCTTAACGGGCCGGATCTTCACCGGAACCACCAACCTTCGCCACCTCCACCTGAACAACGCATCCACAACCCCAGTTCAACCGCAACCCGTTAAATGCCCGCGCTGCGATTCGTCCAACACCAAGTTCTGCTACTACAACAACTACAACCTCGCCCAGCCGCGCCACTACTGCAAGTCCTGCCGCCGTTACTGGACCAAAGGCGGCGTCCTCCGCAACGTCCCCGTCGGCGGCGGATGCCGCAAAACATCCAAACGCGCTTCCTCCAAATCCAAACCCGATAAGAAGCCAGCTCACATCCCGTCTTCTGGATCCAGCTCGGAGTCTTCGTCAAACCCGAAACCACAACCAATAGCACCAATTGTCGCCGCCGAGGCTGATCCCAGACCCGAAGCAGAGCTCACTGCTGGCCTGATCGACTTTACCGATCCGAGTTTGGTACAGGAGGAGAAGGTTAACGGGTTCGATTGGGGAAACGGGTCGGAGGATTCAGGTTCGTTGTTCGATATCATGAATCCAACTGTGAATTACTGGAACCAGACGAATTGGGGTGAAACCGATCCTAATTCTCTATATCTGCCTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	RWW04477.1	8.0e-30	hypothetical protein GW17_00032295
Swissprot	Q6Z345.1	3.1e-31	Dof zinc finger protein 4
trEMBL	A0A835F6P0	1.5e-30	Dof-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G60850.1	70.67	4e-28	122	OBP4	OBF binding protein 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g75443	AT5G60850.1	75	21	1	165	239	49	122	70.67	4e-28	122
g75443	AT1G07640.2	58	11	0	166	223	76	133	81.03	2e-27	119
g75443	AT1G07640.3	58	11	0	166	223	84	141	81.03	2e-27	119

Ortholog group

Species	Genes
Allium cepa	g75443.t1
Allium fistulosum	AfisC8G04739
Allium sativum
Arabidopsis thaliana
Oryza sativa	LOC_Os02g49440.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02701.12	zf-Dof	Family	166	221	108.4	1.3e-31

Gene Ontology

Accession	Ontology	Name
GO:0001067	F	regulatory region nucleic acid binding
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005488	F	binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0009889	P	regulation of biosynthetic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:0097159	F	organic cyclic compound binding
GO:1901363	F	heterocyclic compound binding
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network