result

Gene information

Detail information of g79255


Location
GeneChrStartEndStrand
g79255Scaffold_35252:HRSCAF_356432357049364365-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008798862.11.0e-206serine/threonine-protein kinase Nek5
SwissprotQ94CU5.18.6e-187OsNek5
trEMBLA0A8B7CGW51.2e-206serine/threonine-protein kinase Nek5

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G44200.158.434e-166 582ATNEK6;IBO1;NEK6NIMA (never in mitosis, gene A)-related 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag79255.t1
Allium fistulosumAfisC4G06439
Allium sativumAsa0G03970.1
Arabidopsis thalianaAT3G44200.1; AT3G63280.1; AT3G63280.2
Oryza sativaLOC_Os01g64490.1; LOC_Os05g36960.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain8262221.98.5e-66

Gene Ontology
AccessionOntologyName
GO:0007017Pmicrotubule-based process
GO:0000226Pmicrotubule cytoskeleton organization
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0003824Fcatalytic activity
GO:0007010Pcytoskeleton organization
GO:0004672Fprotein kinase activity
GO:0005623Ccell
GO:0005737Ccytoplasm
GO:0005856Ccytoskeleton
GO:0005874Cmicrotubule
GO:0005881Ccytoplasmic microtubule
GO:0005938Ccell cortex
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0006996Porganelle organization
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0008544Pepidermis development
GO:0009913Pepidermal cell differentiation
GO:0009987Pcellular process
GO:0015630Cmicrotubule cytoskeleton
GO:0016043Pcellular component organization
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0019538Pprotein metabolic process
GO:0030154Pcell differentiation
GO:0030855Pepithelial cell differentiation
GO:0030863Ccortical cytoskeleton
GO:0030865Pcortical cytoskeleton organization
GO:0030981Ccortical microtubule cytoskeleton
GO:0031122Pcytoplasmic microtubule organization
GO:0032502Pdevelopmental process
GO:0036211Pprotein modification process
GO:0043170Pmacromolecule metabolic process
GO:0043226Corganelle
GO:0043228Cnon-membrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043232Cintracellular non-membrane-bounded organelle
GO:0043412Pmacromolecule modification
GO:0043622Pcortical microtubule organization
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044430Ccytoskeletal part
GO:0044444Ccytoplasmic part
GO:0044446Cintracellular organelle part
GO:0044448Ccell cortex part
GO:0044464Ccell part
GO:0048856Panatomical structure development
GO:0048869Pcellular developmental process
GO:0055028Ccortical microtubule
GO:0060429Pepithelium development
GO:0071704Porganic substance metabolic process
GO:0071840Pcellular component organization or biogenesis
GO:0071944Ccell periphery
GO:0097435Pfibril organization
GO:0099512Csupramolecular fiber
GO:0099513Cpolymeric cytoskeletal fiber
GO:0099568Ccytoplasmic region
GO:1901564Porganonitrogen compound metabolic process
GO:0099080
GO:0099081
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08857NEK1_4_5; NIMA (never in mitosis gene a)-related kinase 1/4/5EC:2.7.11.1 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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