Detail information of g8075


Location
GeneChrStartEndStrand
g8075CHR6116947976116961586-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK81351.12.6e-21uncharacterized protein A4U43_C01F28130
SwissprotO04539.37.2e-16Paired amphipathic helix protein Sin3-like 4
trEMBLA0A5P1FWN41.9e-21HDAC_interact domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G70060.140.121e-1892.4SNL4SIN3-like 4

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag221943.t1; g28300.t1; g305880.t1; g310930.t1; g339215.t1; g42107.t1; g421663.t1; g447305.t1; g467029.t1; g8069.t1; g8075.t1; g89566.t1
Allium fistulosumAfisC2G05979; AfisC4G06983; AfisC5G00048; AfisC5G00854; AfisC5G06479; AfisC5G06481; AfisC5G06485; AfisC5G06486; AfisC5G06491; AfisC5G06495; AfisC5G06497; AfisC5G06503; AfisC5G06511; AfisC5G06512; AfisC7G00910; AfisC7G00918
Allium sativumAsa0G00181.1; Asa0G01752.1; Asa4G00028.1; Asa4G04134.1; Asa4G04984.1; Asa4G04987.1; Asa4G04990.1; Asa4G05007.1; Asa6G06258.1; Asa6G06296.1; Asa6G06371.1; Asa6G06638.1; Asa7G04096.1; Asa7G04097.1; Asa7G04275.1; Asa7G04276.1; Asa7G04277.1; Asa7G04278.1; Asa7G04279.1
Arabidopsis thalianaAT3G25550.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00646.30F-boxDomain12516026.83.1e-06
PF02671.18PAHRepeat69772024.32.2e-05

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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