Detail information of g86980


Location
GeneChrStartEndStrand
g86980Scaffold_36450:HRSCAF_378132141606155045-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPKA67023.12.0e-50Nuclear transcription factor Y subunit C-2
SwissprotQ9XE33.13.7e-49Transcriptional activator HAP5D
trEMBLD6MKI81.2e-52Transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G54830.180.185e-50 194NF-YC3nuclear factor Y, subunit C3

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Ortholog group
SpeciesGenes
Allium cepag86980.t1
Allium fistulosumAfisC1G05167
Allium sativumAsa5G04413.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00808.20CBFD_NFYB_HMFDomain16522874.94.2e-21

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08066NFYC, HAP5; nuclear transcription factor Y, gammaEC:- Antigen processing and presentationko04612

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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