result

Gene information

Detail information of g87708

Location

Gene	Chr	Start	End	Strand
g87708	CHR6	296365577	296369654	+

Sequences

CDS

>g87708.t1
ATGCTTGTTGTGTCCACAGAATCTTTCTCTTTTAGCTCACTTCTCAAAACTAAGCTTTTAGTTCATTTATGGAGGGAATTCAAAATTTACCCTTTTAGAATTTATGACTACTCACCTATTCACCTGCTGCACTTTCCCTCCCACTTATTCCTGTCTCTGCCTTTTCAGTATATATCTTTCTCCTACACTTTTCCTCTTTCTTCTCCTCTCTTTTATTCTCTAGCCATGAAACTCTTCTTCTTCTCCATTCTTTTCCTTTACCTCTCTCCATCTTCTCTTTCATGCTATATCTTAACGCAAGCATTCAATTCAGTCTCAAACTTCCATGACACTTACACAAACATTTCTTGCAATGAAATTCAAGAACTCAACCTATCATACAAGTACTTATCTGGCACAGTTTCATGGATGCTCTTAAAAAACATCTCATCTCTTCGTTCAGTCGACTTATCCCATAACCTTCTAGAAGGTTCAGTTCCAGGAAAGTTCTTCTCATCTTCACCTCTCATCAGACTCAACCTTGCTAATAATCACCTTGGAGGCAGTCTTAATTTCAAACCAAACTCGATAATGTATCTTAACGTATCCAAAAATAGATTCACTAATGCGTTCAATATATCGGGTTTATCGAAGTTGCAGTTTCTTGATATGTCCCATAACAACCTCACCTTCATTCCTACAGGCCTTGAAAAGCTTCAAGAGCTGAATTACTTGGATTTTTCTTATAATTCCATGCATGGAGTTTTTCCTAATGATTTCTCTCCTTCTATAATCAAAAGCCTCCATTTTTTGAACCTGTCTTATAATAATTTTTCCGGCACCGTTAATTCAAGCACAGTTAAGAAATTTGGAGCTTCAGCTTTCACTAAAGCAGGCACTTCTTTGCCTCAAACTCATAAGCAGAAGAAGCCTAAAAGCAGTGCAAAAAAGAAACATAAAGAAGTGATCATTGTTGTTACAGTTGCAGTTTTTGCAGGTTTAGCAGTACTGCTACTACTCGGTTATGTGCTAATCATTTTGAAAAGAAAGAGGAAGATAAACAAAGGGTGGAAGGAGGAGGAAAAAGGGGTGAGAATAGCGAAGGAGGTGTCAAGCTGGGTTGCGGAGGCAAAATGGGCAGCTCAGGTGGTGATGTTCGAGAAGCCGTTAATGGAGCTGAGTTTCTCGGATGTGGCGGCTGCGACTTCCGGGTTCAGTAAGGAGTGGCAGTTGGGTGAGAATATTAGTGAAAGCGGCGCTCTTTACCGGGCTGTTTTGCCTGGGGAAATGAATGTGGTGGTCAGAGTGGTGGAGGCGGAGGTTGTGGAAAGAGTTACGGAGATCGCGAAGTTGAGACATCTGAATTTGTTGCCGCTTCTTGGCTATTGTGATGCAGGAAAAGGAAAGCTACTAATATACGAGTACATGGAAAAAGGAGACTTGCACCAATGGCTCCACGAGCTCCCTGCGAACCACCCATACCCTGAAGATCACATCCACGACTCCTACGACCTCAACCAAACCGCCCAACAAACAACAATAACAATCACTAAAAGAACAAGAGACGATTGGCCAACGCGACACAACATTGCATTAGGTATAGCACGAGGGCTTGCCTTCCTCCATCAGGGGTGGGCAGGCTCGAACAGACCGATCGTCCACCCTCACTTGGCTCCCTGCAATGTGCTCCTCGATGAAAACCTAGAACCTAGACTTTCCGATTTCGCTACCGGAGGAGGGGAGGAAACGATGGAGGGCAACGTGTACGGTTACGGGGTTCTGGTGATGGAGTTGGTCACCGGAAGGGACAAGTGGGGCTCGGAGGAGGTGGAAAGGGTGAGGAGGTCAGTCAGGGATGGCAAGGGTCTGAGGGAGGTGGACCCTACAATGAGAGGCTCGGGGGTCAACGATGACAAGTGGGAGAAGGAGATGGTGGATTGCCTTCGGGTTTCCTATTTATGCACTGCGCAATCGCCCGAAAAACGACCTAAGATGCAGCAAGTTGTCGGGCTTATCAAGGACGTTCGTTCGACTTCGATTGATAATATTGCTTCCTCCTCTTCGTTGTGTGTTTAA

Protein

Gene

>g87708.t1
ATGCTTGTTGTGTCCACAGAATCTTTCTCTTTTAGCTCACTTCTCAAAACTAAGCTTTTAGTTCATTTATGGAGGGAATTCAAAATTTACCCTTTTAGAATTTATGGTGCATTAAATATATGACAGTAGTTTAGTTAGACTACTCACCTATTCACCTGCTGCACTTTCCCTCCCACTTATTCCTGTCTCTGCCTTTTCAGTATATATCTTTCTCCTACACTTTTCCTCTTTCTTCTCCTCTCTTTTATTCTCTAGCCATGAAACTCTTCTTCTTCTCCATTCTTTTCCTTTACCTCTCTCCATCTTCTCTTTCATGCTATATCTTAACGCAAGCATTCAATTCAGTCTCAAACTTCCATGACACTTACACAAACATTTCTTGCAATGAAATTCAAGAACTCAACCTATCATACAAGTACTTATCTGGCACAGTTTCATGGATGCTCTTAAAAAACATCTCATCTCTTCGTTCAGTCGACTTATCCCATAACCTTCTAGAAGGTTCAGTTCCAGGAAAGTTCTTCTCATCTTCACCTCTCATCAGACTCAACCTTGCTAATAATCACCTTGGAGGCAGTCTTAATTTCAAACCAAACTCGATAATGTATCTTAACGTATCCAAAAATAGATTCACTAATGCGTTCAATATATCGGGTTTATCGAAGTTGCAGTTTCTTGATATGTCCCATAACAACCTCACCTTCATTCCTACAGGCCTTGAAAAGCTTCAAGAGCTGAATTACTTGGATTTTTCTTATAATTCCATGCATGGAGTTTTTCCTAATGATTTCTCTCCTTCTATAATCAAAAGCCTCCATTTTTTGAACCTGTCTTATAATAATTTTTCCGGCACCGTTAATTCAAGCACAGTTAAGAAATTTGGAGCTTCAGCTTTCACTAAAGCAGGCACTTCTTTGCCTCAAACTCATAAGCAGAAGAAGCCTAAAAGCAGTGCAAAAAAGAAACATAAAGAAGTGATCATTGTTGTTACAGTTGCAGTTTTTGCAGGTACTACCACCACCGCCACTTGGTTATTTGTTGTATGTTCTGAAAAAAGCATTTAGATTTAGTTCTTCAATTTCTTTTATGCTGTATACATTTAGATTTTGAAATTGGTTAAACTGGTATATGAAGTGGATAACTTGATGCAAGATTTTATTTTTATATTTTTTTGGCATTGGCAAGAAAATCGGAAGTGTCTTGTTTGTGATAAGTGTTTAGAACCATGTGAGAACTGTTTAGAACTTTCAAAATGAATAAGCAATAGATTTGGAGTCTTGGAAACAACCTATTTCAAAACTACTTAAAGTTAGGTTTGCCCCGCAATTTATAAGTAGTTTTTAGTGAATAGTAAAATGTGAAAGTGTTTGGATAAATAAGTTAACTGTTACAAAATCAAGTTGTAAAAGTTGGAAAACTCAACTTCTAAGTCACTTATTAAAAGTAGTTGTCAAACATACTTAGTAACAAGTAACTTATAAGCTGCTTTAACTATTTTTAAGCAAAGCTTCTGAATGCTGATGACAAACTTTTCCAAAAGCAAGCACTGTTGCTGCTGCCACTAGGTAACAGTTGAATTTTTTGTAGGTTTAGCAGTACTGCTACTACTCGGTTATGTGCTAATCATTTTGAAAAGAAAGAGGAAGATAAACAAAGGGTGGAAGGAGGAGGAAAAAGGGGTGAGAATAGCGAAGGAGGTGTCAAGCTGGGTTGCGGAGGCAAAATGGGCAGCTCAGGTGGTGATGTTCGAGAAGCCGTTAATGGAGCTGAGTTTCTCGGATGTGGCGGCTGCGACTTCCGGGTTCAGTAAGGAGTGGCAGTTGGGTGAGAATATTAGTGAAAGCGGCGCTCTTTACCGGGCTGTTTTGCCTGGGGAAATGAATGTGGTGGTCAGAGTGGTGGAGGCGGAGGTTGTGGAAAGAGTTACGGAGATCGCGAAGTTGAGACATCTGAATTTGTTGCCGCTTCTTGGCTATTGTGATGCAGGTACCTCAAATTTCAACTTTATAAAAATATATATTAAAATAAGATAAGAGTGATAGTTTATTCAAGTAGAGTACTCAAATATCACGTAATATTTGATTTTGAAACAAGTTAGATTTAAATTTGATTTTGAAACCAGTTAGACTTAAATTTGAAGTGATGGTAATACTGATAGAAGTTTTTTCGGAAAAAAAACTCATAGTTCATGGTGTAACAATTGAAAGCATTTTTATTTTTTTTTTGCAGCAAATGTTTCATTTAAAATGTTAAAAACTTTGGTGAAGTCAAATTACAGAGATGAATTGCTAAATTACAATCCTTTCAAGTACTGATTGACCTTAATATTTGTGGTCTTATTACTTTTACAGCTTTCTGATTACATCTTTTACGTTTGGGTTGTTTTACTTTCAGATTCAACTAAACATTTTAATTTATTTTTTTACGTTCATCAATTTTTATTAAAAGAGGAATATTATGATTCTTTTTAGTTAGAAATTTTAATTACATCAACTATAAACAAATTTATTCATTTGATTTTATATTAAATCAAGACCGTTTTGAAATTGTGAAAATCATTGTTTGATATGTAAAATTGGTGGATGCAATTGTCACAGCTGTTTAACTGTTCTTTTTCTTTTTGACGTCGGGCCGTAAACTCCTGGGAAGGTATAGTATATAGGGAAGCGCATGTTAGGAATCGTAGCGGAGTCATTTTATCAGAACCCAATCCTCCTTTCCCATGGGCCGCATCCACGGACTTAGTTGTTTAACTTAATATCATTTCCTACCTGAACTCTTAAACATGTAAGCAAAACAACTATTTTAGTATGAGAAATCTGTAATTCTTTGATTATTTTAATCTTTGAGCTTCTTAATATCTAAATATTTTAGTTAATTTTCTAATGTTCTTAAAATGTATAATATTTTCACAAATTTTAGATTATTCCATCACTTTGAACTCTTTCAAAACATAAGTTGATTTAAGAGGGAATTAAGGAAAATGACAAACTTTGAAAAAGAAAAAAATAGGCGGAAGAAAACAATGTTTTAGTTTTAGGTTGAAGGACAAATGTTACTTATAATTAGCATTATATTCAACTTTTACATTGTACAAAATGCTAGTTAAATCTAGCATTATATTTAGTTTTACACTATACAAAATGCTAGTTATAACTAGCATTTTCCTTCAGCCTAAAAAATTAAACCTTTTGTCCTTCAGTTTAATTTTTTTTCTAAGTTTGTCATTGTGTCCAATTTCCTGTTGAATTAATTTGTCCAAATATCTATTTCGACCGTTGACTATCATTTTGGGCTAATCTCGAGATGTATAAAATAAGCGACCTTTACGGGGGATTAATTCAACTATTATAATATTTGGCATTTACAATTCAGTACTCACCTATTTTTTACCGCAGGAAAAGGAAAGCTACTAATATACGAGTACATGGAAAAAGGAGACTTGCACCAATGGCTCCACGAGCTCCCTGCGAACCACCCATACCCTGAAGATCACATCCACGACTCCTACGACCTCAACCAAACCGCCCAACAAACAACAATAACAATCACTAAAAGAACAAGAGACGATTGGCCAACGCGACACAACATTGCATTAGGTATAGCACGAGGGCTTGCCTTCCTCCATCAGGGGTGGGCAGGCTCGAACAGACCGATCGTCCACCCTCACTTGGCTCCCTGCAATGTGCTCCTCGATGAAAACCTAGAACCTAGACTTTCCGATTTCGCTACCGGAGGAGGGGAGGAAACGATGGAGGGCAACGTGTACGGTTACGGGGTTCTGGTGATGGAGTTGGTCACCGGAAGGGACAAGTGGGGCTCGGAGGAGGTGGAAAGGGTGAGGAGGTCAGTCAGGGATGGCAAGGGTCTGAGGGAGGTGGACCCTACAATGAGAGGCTCGGGGGTCAACGATGACAAGTGGGAGAAGGAGATGGTGGATTGCCTTCGGGTTTCCTATTTATGCACTGCGCAATCGCCCGAAAAACGACCTAAGATGCAGCAAGTTGTCGGGCTTATCAAGGACGTTCGTTCGACTTCGATTGATAATATTGCTTCCTCCTCTTCGTTGTGTGTTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008789990.3	1.7e-122	LOW QUALITY PROTEIN: calmodulin-binding receptor kinase CaMRLK-like
Swissprot	Q9FK63.1	1.7e-76	Protein MATERNAL EFFECT EMBRYO ARREST 62
trEMBL	A0A835Q4G6	1.8e-131	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G45800.1	36.84	2e-98	357	MEE62	Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g87708	AT5G45800.1	665	313	23	90	672	26	665	36.84	2e-98	357
g87708	AT2G24230.1	641	332	22	120	672	237	851	30.42	8e-62	235
g87708	AT2G24230.1	211	111	8	99	275	45	251	29.38	2e-10	64.7

Ortholog group

Species	Genes
Allium cepa	g87708.t1
Allium fistulosum	AfisC6G00023
Allium sativum	Asa0G00992.1; Asa8G05974.1
Arabidopsis thaliana	AT5G45800.1
Oryza sativa	LOC_Os02g14480.1; LOC_Os06g35200.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13855.3	LRR_8	Repeat	211	271	28.0	1.2e-06
PF07714.14	Pkinase_Tyr	Domain	433	569	47.2	1.6e-12

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0005515	F	protein binding
GO:0008152	P	metabolic process
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0005488	F	binding
GO:0005516	F	calmodulin binding
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0006970	P	response to osmotic stress
GO:0007275	P	multicellular organism development
GO:0009790	P	embryo development
GO:0008150	P	biological_process
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009625	P	response to insect
GO:0009628	P	response to abiotic stimulus
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009733	P	response to auxin
GO:0009791	P	post-embryonic development
GO:0009793	P	embryo development ending in seed dormancy
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0010154	P	fruit development
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0022414	P	reproductive process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0036211	P	protein modification process
GO:0042221	P	response to chemical
GO:0043170	P	macromolecule metabolic process
GO:0043207	P	response to external biotic stimulus
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0046777	P	protein autophosphorylation
GO:0048316	P	seed development
GO:0048608	P	reproductive structure development
GO:0048731	P	system development
GO:0048856	P	anatomical structure development
GO:0050896	P	response to stimulus
GO:0051704	P	multi-organism process
GO:0061458	P	reproductive system development
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network