result

Gene information

Detail information of g89100


Location
GeneChrStartEndStrand
g89100Scaffold_36719:HRSCAF_385133102396111226-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020092928.14.1e-179transcriptional adapter ADA2-like
SwissprotQ75LL6.26.2e-172Transcriptional adapter ADA2
trEMBLA0A6P5FHJ03.0e-179Transcriptional adapter

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G16420.150.391e-139 493ADA2B;PRZ1homolog of yeast ADA2 2B

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag89100.t1
Allium fistulosumAfisC1G07086
Allium sativumAsa7G02558.1
Arabidopsis thalianaAT4G16420.1; AT4G16420.2; AT4G16420.3
Oryza sativaLOC_Os03g53960.1; LOC_Os03g53960.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00569.14ZZDomain529436.42.9e-09
PF00249.28Myb_DNA-bindingDomain11315545.45.9e-12

Gene Ontology
AccessionOntologyName
GO:0051276Pchromosome organization
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0003674Fmolecular_function
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0003712Ftranscription cofactor activity
GO:0003713Ftranscription coactivator activity
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006325Pchromatin organization
GO:0006338Pchromatin remodeling
GO:0006355Pregulation of transcription, DNA-templated
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0006996Porganelle organization
GO:0008150Pbiological_process
GO:0009889Pregulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0009987Pcellular process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010638Ppositive regulation of organelle organization
GO:0016043Pcellular component organization
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031056Pregulation of histone modification
GO:0031058Ppositive regulation of histone modification
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0031399Pregulation of protein modification process
GO:0031401Ppositive regulation of protein modification process
GO:0032268Pregulation of cellular protein metabolic process
GO:0032270Ppositive regulation of cellular protein metabolic process
GO:0033043Pregulation of organelle organization
GO:0033044Pregulation of chromosome organization
GO:0035065Pregulation of histone acetylation
GO:0035066Ppositive regulation of histone acetylation
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051128Pregulation of cellular component organization
GO:0051130Ppositive regulation of cellular component organization
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051246Pregulation of protein metabolic process
GO:0051247Ppositive regulation of protein metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051254Ppositive regulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0071840Pcellular component organization or biogenesis
GO:0080090Pregulation of primary metabolic process
GO:1901983Pregulation of protein acetylation
GO:1901985Ppositive regulation of protein acetylation
GO:1902275Pregulation of chromatin organization
GO:1902680Ppositive regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:1905269Ppositive regulation of chromatin organization
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000756Pregulation of peptidyl-lysine acetylation
GO:2000758Ppositive regulation of peptidyl-lysine acetylation
GO:2001141Pregulation of RNA biosynthetic process
GO:2001252Ppositive regulation of chromosome organization
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K11314TADA2A, ADA2; transcriptional adapter 2-alphaEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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