Gene | Chr | Start | End | Strand |
---|---|---|---|---|
g90830 | Scaffold_36957:HRSCAF_390095 | 21542 | 46762 | + |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | AGC31682.1 | 1.1e-116 | MADS-box transcription factor |
Swissprot | Q40704.1 | 3.7e-82 | RMADS222 |
trEMBL | L7T9X9 | 7.6e-117 | MADS-box transcription factor |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT4G18960.1 | 66.67 | 4e-82 | 301 | AG | K-box region and MADS-box transcription factor family protein |
Species | Genes |
---|---|
Allium cepa | g26966.t1; g90830.t1 |
Allium fistulosum | AfisC2G04165; AfisC2G04172; AfisC3G08718 |
Allium sativum | Asa2G01007.1; Asa8G02254.1 |
Arabidopsis thaliana | AT4G18960.1; AT4G18960.2 |
Oryza sativa | LOC_Os01g10504.1; LOC_Os01g10504.2; LOC_Os01g10504.3; LOC_Os05g11414.1 |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF00319.15 | SRF-TF | Domain | 89 | 136 | 91.5 | 1.5e-26 |
PF01486.14 | K-box | Family | 166 | 252 | 90.4 | 5.9e-26 |
Accession | Ontology | Name |
---|---|---|
GO:0000003 | P | reproduction |
GO:0005622 | C | intracellular |
GO:0005575 | C | cellular_component |
GO:0003002 | P | regionalization |
GO:0003006 | P | developmental process involved in reproduction |
GO:0003674 | F | molecular_function |
GO:0003700 | F | transcription factor activity, sequence-specific DNA binding |
GO:0005623 | C | cell |
GO:0005634 | C | nucleus |
GO:0043231 | C | intracellular membrane-bounded organelle |
GO:0006355 | P | regulation of transcription, DNA-templated |
GO:0007275 | P | multicellular organism development |
GO:0009653 | P | anatomical structure morphogenesis |
GO:0007389 | P | pattern specification process |
GO:0009888 | P | tissue development |
GO:0008150 | P | biological_process |
GO:0009791 | P | post-embryonic development |
GO:0009889 | P | regulation of biosynthetic process |
GO:0009908 | P | flower development |
GO:0010022 | P | meristem determinacy |
GO:0010073 | P | meristem maintenance |
GO:0010093 | P | specification of floral organ identity |
GO:0010097 | P | specification of stamen identity |
GO:0010468 | P | regulation of gene expression |
GO:0010556 | P | regulation of macromolecule biosynthetic process |
GO:0010582 | P | floral meristem determinacy |
GO:0048646 | P | anatomical structure formation involved in morphogenesis |
GO:0019219 | P | regulation of nucleobase-containing compound metabolic process |
GO:0019222 | P | regulation of metabolic process |
GO:0022414 | P | reproductive process |
GO:0031323 | P | regulation of cellular metabolic process |
GO:0031326 | P | regulation of cellular biosynthetic process |
GO:0032501 | P | multicellular organismal process |
GO:0032502 | P | developmental process |
GO:0035670 | P | plant-type ovary development |
GO:0043226 | C | organelle |
GO:0043227 | C | membrane-bounded organelle |
GO:0043229 | C | intracellular organelle |
GO:0044424 | C | intracellular part |
GO:0044464 | C | cell part |
GO:0048367 | P | shoot system development |
GO:0048437 | P | floral organ development |
GO:0048438 | P | floral whorl development |
GO:0048440 | P | carpel development |
GO:0048443 | P | stamen development |
GO:0048444 | P | floral organ morphogenesis |
GO:0048448 | P | stamen morphogenesis |
GO:0048449 | P | floral organ formation |
GO:0048455 | P | stamen formation |
GO:0048466 | P | androecium development |
GO:0048467 | P | gynoecium development |
GO:0048481 | P | plant ovule development |
GO:0048507 | P | meristem development |
GO:0048608 | P | reproductive structure development |
GO:0048731 | P | system development |
GO:0048827 | P | phyllome development |
GO:0048856 | P | anatomical structure development |
GO:0050789 | P | regulation of biological process |
GO:0050794 | P | regulation of cellular process |
GO:0051171 | P | regulation of nitrogen compound metabolic process |
GO:0051252 | P | regulation of RNA metabolic process |
GO:0060255 | P | regulation of macromolecule metabolic process |
GO:0061458 | P | reproductive system development |
GO:0065007 | P | biological regulation |
GO:0080090 | P | regulation of primary metabolic process |
GO:0090567 | P | reproductive shoot system development |
GO:0099402 | P | plant organ development |
GO:1903506 | P | regulation of nucleic acid-templated transcription |
GO:2000112 | P | regulation of cellular macromolecule biosynthetic process |
GO:2001141 | P | regulation of RNA biosynthetic process |
GO:0090696 | ||
GO:0090697 | ||
GO:0090698 | ||
GO:0090701 | ||
GO:0140110 | ||
GO:1905392 | ||
GO:1905393 |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
K09264 | K09264; MADS-box transcription factor, plant | EC:- | - | - |