result

Gene information

Detail information of g91452

Location

Gene	Chr	Start	End	Strand
g91452	Scaffold_37063:HRSCAF_392292	176040	181430	+

Sequences

CDS

Protein

Gene

>g91452.t1
ATGGGATGCTCTTTCTCTGGTCTGAACGCTTTGTATGACGCAGTTAATGGCGGAGGAGACGTTTGGATCAACGAAAACAGATTTAGAATCATAAAACAATTAGGCGAAGGAGGTTTCGCATTTGTTTATCTTGTTAAAGAAATCATTTCTGATAGCTCTACTCCTAATGGCGGTCTAGCTGGAAATAAAATCAAGAATCCTTCTCACGTTTCAGGTCAAACAATCAATTTGCTTACTTCCATAATCGTCGATTGATTTTGTTAGTTGGGTAACTTAATATCTTCTGCATAATTGACATAGATGATGGAACATATGCTATGAAGAAAGTTATAATTCAAAGTGAGGAACAATTGACACTTGTAAGAGAAGAGATCCATGTTTCGTCTCTTTTTAGTCATCCCAATTTGCTTCCACTTCTCGATCATGCAATCATAGCAGTCAAGGTATGAATCACACTTTCTTATTTTTCAGTTTTATAGTTCAGTGAATATTGGAAGTCAACTAAAGTCATCTTTGTAGCTATTAGCTGCTACATTCCACAAGAGTAACTTTTTTATCACAAGTGGAAGTTCATTTTGGAGTGTTAAGTAAATGGTAATTTCTTAAATATATATATTTCGAAATTTCATGCATATGGAATTGATGTTGGTTGATTGTCAACTCTCAGTTTTCATTCTCCAACAGTAGGACATGTATGGTGAACAATACTATATGATGCTGAGGATACATCTAGTCGACAAACATCCAAAATCTAAAATATGTTGGTAAACATATTATATATTAATCAACGATAGTATATAATTTTAAAAACTTAAACTTTAAACTCATATTTGACGTTTCTGTCAAAATTACTCATAGTTCATCATATCAGAGAAATAAAATAGTAATTTAAAGAATAGAAAACACCCAACGCAACCCCAGTGTACCCATCACATATCATACCGCGTATTGTATTTACTACCAGTGCATATGGCGTGTAATACATCGATCGTTGTGTGTAAATTTATTAGTAGGTGGATGGTGGGTGTGCTATTTATGGTTAGACACATAATTATAATTATATATGATATGTATATGTAATTATTAATTTTCTGTTAATCTGTATTTTTTTACTACTTGCAAAGTGAACAAGTTCATAAATCAATTTTACTTCATAATTAGGGAAGCCAACAAGGATCATGGCAACATGAAGCCTACTTGTTATTTCCTGTTCATTTGGATGGAACCTTGTTGGACAATGCAAAAATAATGCAAGCAAAGAAAGAATTTTACCCTACTCTCACTGTTCTTCAAATATTCAGACAGGTATCATAAAATATTACTTTCTTATTTATGCTATTCTCATTTATCCTTATACATATAATTGTAATTGAAGTTCTTGCATCTTTATTGATATATCATTTTACATGAGTACCAACTGAATTTTTATTTTTCCTGGCAGCAGTCAATATCATTTTCAATCAACTGTTTGTCCCGGAAGAGATGAAAACTTTTTTTTTTCTGAGCCGTCTTTAGAAAGCGTTATATTATGCTGATTTGAATAATATCCAGCCCTTGATATATCCAACAGAATGTTGCTCTGATCTCAAGGCTCTCATGAAGTGGGAGCTTTTTGCATTTGATTCTCACTTTTAAACTTAAAGTAACTATTTAGACTTGAAAGTATCATAATGTTGACACGATGACTTTGACATCAAACTCTTAGCTTTATTTGATTGGCATTATCATTTTTGAACTGAGATTAGTACCTTAAATTTAACACCATGTATTAACATCTTCCTCTATACATTCCAAAAGAAGTATAGGGTATAAGGATAATCCAATGAAATAAGGAAAATAGTAGATGAAAGCTTAAATTGAAGTTAAGTTTCGGTATGGAAATAACACTACATTGTCCAAATTCTCCATAATTCATTCATTGTCTAATAACTGTAAGACTAGTTTGTGTTAATGATATTTTCCGAGAACAATTATTTCCTTGGTGTTAATATGTAATTGTGAACAGCTATGTGCAGGTCTAAAACATATGCATAGTTTTGATCCTCCATATGCTCATAATGATGTTAAACCTGGCAATGTTTTATTAACTCTTAGACAAGGTCAACCACCTCTTGCAATTCTTATGGATTTTGGTAGTGCTCGTCCTGCAAAGAGGCAAATACGTTCCCGTTCAGAAGCTCTACAATTGCAGGTAAGGGATCATCTTTTCATCAAGGAAGAACTCTAATTTTCACCTATTGTTGTAGATAATACTCCTTATTTGTATGTATCACTTTAGATAGAATTTAGAAGCTTGGAGCGGGCATGGAGAGTAGGAATAAGTACTGAAATTGAAATGGGAAAATGTGATTAAATAGAAAAGTTTAATGTGAGAACATAAAAACATGTTTTTCTATGAACTGTCATGTAAGTTTATAAACGTTTGTCCGTTGTACAACTGAGCCTTTTGCTATGTACACCCAATTTATACTGCATTTGTAGTGTTAATGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTTCTTTTTCTTTTTTCTTTTTCTTTTTCTTTTTTTTTCTTTTTTTTTCTTTTTTTTTTCTTTTTTAATTTTTGAACATATCAAAATCAAGAATGTAGAAAACTGAAGTACAGAAAATAAGCTTATTTCAAAGTTTGTCGTCTCATTATTGGACATATTATCAGATATTCTCGGCCCTAGAAAGATGTATTTCTAACGATTATGAAACTTGTTCCATCAACTCAAGATCGCGATTCTATTGTGTTTTCAAGTAAGAAAGACTAAACCATGGTTCTAACTAAAAAATATTGGTTAATTTGAGGGTTCTGGTTTATAAGAGCCAGAAGAGAGTAGCTTCATTTTTGGAGATCCTGTGATTGATTATCGAAGATTCTTATGAATTTTTCCCGTATTGATATGAAGATGGGACTTTAGTATGAATATGGGACTTTAGTATATACTCACATGTTACTTGGAATTTGGTGTATCTTTGTAGTTAATTTTAATAATTCATGTTTTTGTTAGATGTTACCTTTACCCAAGAACACACACACACACATCAAACTTAAACTTACGTGCCTCTCAATACATTTCCATTTCATGTTTGTTCTTGAGCGGTTTTCTCATGTTGCAAGTTGTAACAAACTTTACCAAACACTTGATAGTTAGTCCTTATTTTTGCACATTATAGAAACTGAGTGAACCAAAAGATGACATCTTGGACATGTGGTATTTATTCGCTTTTGTCAAGTTTTCATGTATTTCATCAACAACAAATATCTCTACACTTTGATTAGCAAAGCCAGGCATATAGTTGCCATAAACTAGAGTTATAGTTTCTGTTTTAAAAGCAAAATATCTTTAAATGACAAAAGAAAAAAGAAAAAAAGCACAGTGAAGTCTTAGTAAAATTTGAACCTATTTTGGTTCAATTTGTCAGGTCGTGGAATTAAAACTTTGTGCTCTATTGAACTAAAAACCTGTTTGCACTTTGTGCAAATAGTGTGCTTCTCTCATGCAAAACTTTTTCCCATCTCTATGATTTTTTGTGATGAAAAGATGTAAAGCTTAAAATTGATATTTTTTGTTTCGACGATATTAGTTTCTCATGAATTTATAGGAATGGGCTGCTGAGCATTGCACTGCACCTTTCCGAGCTCCTGAATTGTGGGACTGCCCAAGCCAAGCTGACATTGATACAAGGACAGATATCTGGTCTTTAGGATGTACCTTATATGCAATAATGTAAGAATACTTTGTTTACCTATATGCGGATGTATTACTTTGTGTTTGTATATGGGTTAGTAAAGTTACAAACTTAAATCCAAGAAGCATAGTAATAAAAGACGAGATCTGGGTTACCAAAACAAAATAAAATACTTGCCAAGTGATTGGTAAATCTAACAATTTTGATAAGACAAGGTGCAAACTAAAAAAATTGGGTTTGTTGAAGCCGGACCTCAACTCGGTATGAAATTGAAAATATAAAGATAAATACTTTATCTTGCCTTAATTTATATATTTTTTGCTCTATAAGTTTGCATTTCACCCCTACTGGTAGACAACTGACATGCACAATGTTCGTGTACGTACCTTGTTTAAATCATAGATCTGCTACATACACCTGTTTTATGTTTCCATAATCCCTCAACTTAATAAATCCACAATGCTCACACCAATCCATAATCGTCAGCCTTCGCAACATTAACTAGTGTTTTATTAACGCGTGCCCTTCACCATGACCCCTATTATATTCACCAAATCAAAGCCAAATTGAGATCATCCGACCATAAAATTGATGTTTTTTTGATGCGCAGGCTTATGGAGTGAGAAAACTAAGGGCTTGTTTGGTTTGAACTTTAAGTTTTATATTCTACATTTTCAACATGTATTTCTAAAATGGCAATGTAAGAAGGTGGTGGATAATCCACAACCAAGGGGAGCATAGGACGGGAGAAGATAGTTTGACATGTTTTTGACATTTCCCAAAAGACGTAATTAAAAAAAAAAGTCATTTTCAATTTTATATGTTAGAATCATTTTTCAAATCGACCATTTTGAAAACACAATGCATTTTAGTAGTTAATAAATCTCTAAACTGAATTCTGCAAGCCAAATAAGGTCTAATATATTTTCATTTTTGAAAGTGCGATTAATGGAGTTAGGAGGTGGGTGTATACAGCAGCAAAATTGAATTGAGTTTGCTCAAATTTATGGCAGAACAAACAAAACAAAAAATCAAAATGAAACTTAAAAATAAACAAATTGGTTTATGTAATTTTAATTACTTTCTGGTTCAGGCATACAACTTTCATTTGAAATTGGAGTACTATCTAACATGATGGTGACAAGCTATCCATTTTTTTTTTGTTTCTTTCGGGGTTTGGGGGGGGGGGGGTGTGGGGGTAGGGGTGGGTTCATGTATGTACAAATAGAATGCAAAAATGAAACATTATAATAAGGTGAAGGTAGTAAAAGTGCGGTGCAATTTGGAAGGTTGAAATTATGGGGATTACCTATGAATGCCTTTTTTGGGTTAGGATGTGAAAACGCTATTGTCTTACTGTTTGCTTATCAAAATTGTTTGTTTTGATACCATGCAACATAATAAGCTAATTGCTTCCAGTATTGCGAACATCTATTCCTATTGTTTCTTTCAGGTATGGCGTATCGCCTTTTGAATATGCACTTGGTGAATCAGGTGGAAGTTTGCAGCTTGCGATTATTAATGCACAGATTAAATGGCCAGCAGCTCCTGCTCCTCAATACCCAGAACCTCTTCGTCAGTTCATTCTCTGGATGCTACAGTCCCAGCCTGCAGTCCGGCCTCACATTGATGATATTGTCATTCACGTCGATAAACTCATATCCAAATTTTCATCTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020264440.1	6.8e-181	probable serine/threonine-protein kinase DDB_G0291350
Swissprot	P57760.2	6.8e-45	Tyrosine-protein kinase STK16
trEMBL	A0A5P1EZ39	4.9e-181	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G08160.1	79.19	1e-167	585	ATPK3;PK3	serine/threonine protein kinase 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g91452	AT5G08160.1	346	70	2	1	344	1	346	79.19	1e-167	585
g91452	AT5G08160.2	345	57	2	1	344	1	310	73.04	8e-149	523
g91452	AT2G32850.1	309	166	12	34	340	33	298	31.72	4e-28	122

Ortholog group

Species	Genes
Allium cepa	g52877.t1; g91452.t1
Allium fistulosum	AfisC1G00915; AfisC2G09424; AfisC4G06025
Allium sativum	Asa5G05051.1; Asa7G01013.1
Arabidopsis thaliana	AT5G08160.1; AT5G08160.2
Oryza sativa	LOC_Os09g06230.1; LOC_Os09g20640.1; LOC_Os09g20640.2; LOC_Os09g20640.3

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	69	335	104.1	7e-30

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0005829	C	cytosol
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009719	P	response to endogenous stimulus
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0070887	P	cellular response to chemical stimulus
GO:0036211	P	protein modification process
GO:0042221	P	response to chemical
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044444	C	cytoplasmic part
GO:0044464	C	cell part
GO:0046777	P	protein autophosphorylation
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0070848	P	response to growth factor
GO:0071310	P	cellular response to organic substance
GO:0071363	P	cellular response to growth factor stimulus
GO:0071495	P	cellular response to endogenous stimulus
GO:0071559	P	response to transforming growth factor beta
GO:0071560	P	cellular response to transforming growth factor beta stimulus
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08856	STK16; serine/threonine kinase 16	EC:2.7.11.1	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network