Detail information of g92126


Location
GeneChrStartEndStrand
g92126Scaffold_37167:HRSCAF_394997347462360568+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrAYU71103.14.8e-55transcription factor WRKY65
SwissprotQ9LP56.11.2e-37WRKY DNA-binding protein 65
trEMBLA0A5K6WDL33.5e-55Transcription factor WRKY65

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G29280.147.885e-49 191ATWRKY65;WRKY65WRKY DNA-binding protein 65

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag92126.t1
Allium fistulosumAfisC6G04286
Allium sativumAsa8G02821.1
Arabidopsis thalianaAT1G29280.1; AT3G58710.1; AT3G58710.2
Oryza sativaLOC_Os01g53040.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03106.12WRKYDomain18724387.83.9e-25

Gene Ontology
AccessionOntologyName
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0008150Pbiological_process
GO:0009889Pregulation of biosynthetic process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.