Detail information of g92294


Location
GeneChrStartEndStrand
g92294Scaffold_37178:HRSCAF_3951805620679974-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008794126.14.2e-270probable serine/threonine-protein kinase At1g54610 isoform X2
SwissprotF4I114.13.4e-168Probable serine/threonine-protein kinase At1g09600
trEMBLA0A8B7C9023.9e-270probable serine/threonine-protein kinase At1g54610 isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G53050.162.230.0 834Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag92294.t1
Allium fistulosumAfisC2G04167
Allium sativumAsa6G01791.1
Arabidopsis thalianaAT1G53050.1
Oryza sativaLOC_Os01g10430.1; LOC_Os01g10430.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00069.22PkinaseDomain114398233.91.8e-69

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0051726Pregulation of cell cycle
GO:0016020Cmembrane
GO:0003824Fcatalytic activity
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0004693Fcyclin-dependent protein serine/threonine kinase activity
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0008150Pbiological_process
GO:0009987Pcellular process
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0019538Pprotein metabolic process
GO:0036211Pprotein modification process
GO:0043170Pmacromolecule metabolic process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043412Pmacromolecule modification
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0065007Pbiological regulation
GO:0071704Porganic substance metabolic process
GO:0071944Ccell periphery
GO:0097472Fcyclin-dependent protein kinase activity
GO:1901564Porganonitrogen compound metabolic process
GO:0140096

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K08819CDK12_13; cyclin-dependent kinase 12/13EC:2.7.11.22 2.7.11.23 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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