result

Gene information

Detail information of g94451

Location

Gene	Chr	Start	End	Strand
g94451	Scaffold_37457:HRSCAF_401851	143671	145629	+

Sequences

CDS

Protein

Gene

>g94451.t1
ATGGATGATGATCAAGAGCACCATTCAAACCATCAAAGACCACAATACTTCCCTCTCCAACTACTAGAAAAAACCGCCACCGCCACCGCCATCAACAAACAAGAGCCCGGTCAAATCGCCAATCCCAACCCCACCTCGGATCCACCCAAAAAGCCTCCTCCGAAACGAGCACCCACCAAAGACCGGCACACCAAGGTCGACGGCAGAGGGCGCAGAATACGCATGCCCACCCTCTGCGCTGCACGCGTCTTCCAGCTTACCCGCGAGCTCGGCCATAAATCCGATGGAGAAACGGTCGAGTGGCTGCTCCAGCAAGCCGAACCCTCCGTCATCGCTGCCACGGGCACAGGCACCATACCCGCCAACTACACTTCCCTTAACATCTCCCTTAGGTCTTCCAGATCTTCCATTTCCGCACCCGCTTACTTCAATCATTCGAAGCAAGCTGCGTTATTTCAGTCTGGTTTTCAGACTGGATCTCTCAATTTGGATTTGGATTTGTCGGAAGACGATCCGGTGAACATTAGGAAGCGGCGCTGGGAGCAAGAGATTGGTCAAATGCCAGGTGCGCGGTGGATGATGGCGAACCCTAGTTATGTGAATCGAAACCTTAACCCTAGTTTGATGGGTGCTGAGTCATCGTCATCTTCTTCAGTATGGGCTACGTTTCCTCAGATGGGAACAGCTATGGGGTCTGCAACGAATACAGGCTTACATTTCATGAACTTTCCGACGTCAATGGATGCAACTCAGCAGTTAGGGTTTAATGAAGGTAGTAGTTATATGGGGAGATTGGCTGCAAGGACGATTTGGGAATCCCAACAGCATCTACGTGGAGGTGGTGGAGAAGAAGATCATACTAATGAGAGACAAGGATGATACGTTCTAATAACTTGGATTGGGTATGTATGAAAACTTTTGCGTTTTTTAATGCTTTCATCATGATTTTGCTTCTTGATTCAAACGTATAATCTCATCCTGCTCCTTTTCTATCCATTTTTTTACAGTTTTTTCTAGGAAGTCATAATTTCTATGGATGGAAGATTTATTTACTTGTTTGTTAGGGTTTGTTTAAATTTTTGATACTGGCAAACGATGGTATGAAATCATTGATGTAATCACCATTCCTCTTCTTCATTTTGTATTTGTTTTTCCTTCATACACACGGTTTGTAAATATTTAAAAACATTTTCATGAACTAAATATGCTGTCCAGTTTCTTTTTTTTTTTTCGGAGTTAGCTAGCTAGAGTTTGATGCTTTATCACATTTTTCAAGAACTTAAGTGCATGTATTAATTTAAATTCTTTCATTGGTCGATTGATTAACATTCAGTGTCACAATATGAAATTATCCTAGCAAATTTCATTAGTCAGAATTTCCATTTCATTTATGCGTTTATACTAAAGTACAATGTTTGCTTAAAAAACATATTACTTTTATACGTAATAATTAGGCACAATGTCCTAGAGTAAACCATTATTTTTAAATTATTAGTTGTAAAATATTTGTGCACATTAATTTATATAATAGATGGTTATCATACATTGCTTTAATCAAAAACTTATATTTTTAGGGATAGTGAACAAAAGGTACACTGTATACTATACTAGTATTGCATATGATCCATATACTGGGAGTAGCTAGGAAGCTTTAAAATAAGATTAACGTACTCACTGATCTCCTAGCTAAGATTATTTTGTACCTGCTTTCATGAGTTTTAGAAACTCGAGCAAATAATTTTTTTATCTAAAAAATAACTGCACTTGGACATATATCTTATCCAAATTTAGCTGGAATAAAATACAAAAATAATGTCCTTACTAGGGGTATTATTTGGATACTAACAGGTAGATAATACTTTGGGATGCTTTTATACTAGAGAAACTTTTTACCTACTCATATATGTACGTGTGGAAAGAGACGTCACTACAGGTATACGAGCAGTTCAATACCTCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	RRT46988.1	3.9e-45	hypothetical protein B296_00042857
Swissprot	Q93Z00.1	2.5e-33	Transcription factor TCP14
trEMBL	A0A426Y5E6	2.8e-45	TCP domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G69690.1	68.75	8e-42	167	AtTCP15;TCP15	TCP family transcription factor

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g94451	AT1G69690.1	128	33	4	1	128	1	121	68.75	8e-42	167
g94451	AT1G58100.1	82	13	0	59	140	60	141	84.15	7e-38	154
g94451	AT1G35560.1	107	24	3	56	157	52	156	71.03	8e-37	150

Ortholog group

Species	Genes
Allium cepa	g151731.t1; g94451.t1
Allium fistulosum	AfisC4G00794; AfisC7G02059
Allium sativum	Asa3G03220.1; Asa4G00730.1
Arabidopsis thaliana	AT1G69690.1
Oryza sativa	LOC_Os02g51280.1; LOC_Os06g12230.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03634.10	TCP	Family	58	151	129.5	1.4e-37

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0006260	P	DNA replication
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0001101	P	response to acid chemical
GO:0008152	P	metabolic process
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006139	P	nucleobase-containing compound metabolic process
GO:0006259	P	DNA metabolic process
GO:0006261	P	DNA-dependent DNA replication
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006725	P	cellular aromatic compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007049	P	cell cycle
GO:0007275	P	multicellular organism development
GO:0007623	P	circadian rhythm
GO:0008150	P	biological_process
GO:0008283	P	cell proliferation
GO:0009058	P	biosynthetic process
GO:0009059	P	macromolecule biosynthetic process
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009735	P	response to cytokinin
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0009791	P	post-embryonic development
GO:0009889	P	regulation of biosynthetic process
GO:0009908	P	flower development
GO:0009962	P	regulation of flavonoid biosynthetic process
GO:0009987	P	cellular process
GO:0010029	P	regulation of seed germination
GO:0010033	P	response to organic substance
GO:0010229	P	inflorescence development
GO:0010252	P	auxin homeostasis
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0022402	P	cell cycle process
GO:0022414	P	reproductive process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0031347	P	regulation of defense response
GO:0031537	P	regulation of anthocyanin metabolic process
GO:0031540	P	regulation of anthocyanin biosynthetic process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0033993	P	response to lipid
GO:0034641	P	cellular nitrogen compound metabolic process
GO:0034645	P	cellular macromolecule biosynthetic process
GO:0042023	P	DNA endoreduplication
GO:0042221	P	response to chemical
GO:0042592	P	homeostatic process
GO:0043170	P	macromolecule metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044249	P	cellular biosynthetic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0044786	P	cell cycle DNA replication
GO:0046483	P	heterocycle metabolic process
GO:0048367	P	shoot system development
GO:0048438	P	floral whorl development
GO:0048467	P	gynoecium development
GO:0048511	P	rhythmic process
GO:0048580	P	regulation of post-embryonic development
GO:0048583	P	regulation of response to stimulus
GO:0048608	P	reproductive structure development
GO:0048731	P	system development
GO:0048856	P	anatomical structure development
GO:0048878	P	chemical homeostasis
GO:0050789	P	regulation of biological process
GO:0050793	P	regulation of developmental process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051239	P	regulation of multicellular organismal process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0065008	P	regulation of biological quality
GO:0071704	P	organic substance metabolic process
GO:0080090	P	regulation of primary metabolic process
GO:0080134	P	regulation of response to stress
GO:0090304	P	nucleic acid metabolic process
GO:0090567	P	reproductive shoot system development
GO:0097305	P	response to alcohol
GO:1900140	P	regulation of seedling development
GO:1901360	P	organic cyclic compound metabolic process
GO:1901576	P	organic substance biosynthetic process
GO:1901700	P	response to oxygen-containing compound
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000026	P	regulation of multicellular organismal development
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network