Gene | Chr | Start | End | Strand |
---|---|---|---|---|
g95920 | Scaffold_37629:HRSCAF_406264 | 179342 | 189433 | - |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | XP_020256110.1 | 1.8e-138 | protein tesmin/TSO1-like CXC 2 |
Swissprot | Q9LUI3.1 | 1.5e-76 | CRC domain-containing protein TSO1 |
trEMBL | A0A5P1EGI0 | 8.4e-122 | CRC domain-containing protein |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT3G22780.1 | 37.33 | 8e-97 | 351 | ATTSO1;TSO1 | Tesmin/TSO1-like CXC domain-containing protein |
Species | Genes |
---|---|
Allium cepa | g95920.t1 |
Allium fistulosum | AfisC3G00090; AfisC3G03581; AfisC3G03582; AfisC7G03636; AfisC7G04993; AfisC8G02696; AfisC8G03721 |
Allium sativum | Asa3G01065.1; Asa3G01072.1; Asa3G01073.1 |
Arabidopsis thaliana | AT3G22760.1; AT3G22780.1; AT4G14770.1 |
Oryza sativa | LOC_Os07g07974.1; LOC_Os12g41230.1; LOC_Os12g41230.2; LOC_Os12g41230.3 |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF03638.12 | TCR | Domain | 457 | 492 | 43.8 | 2.1e-11 |
PF03638.12 | TCR | Domain | 544 | 578 | 43.4 | 2.8e-11 |
Accession | Ontology | Name |
---|---|---|
GO:0000003 | P | reproduction |
GO:0005622 | C | intracellular |
GO:0005575 | C | cellular_component |
GO:0001067 | F | regulatory region nucleic acid binding |
GO:0003006 | P | developmental process involved in reproduction |
GO:0003674 | F | molecular_function |
GO:0003676 | F | nucleic acid binding |
GO:0003677 | F | DNA binding |
GO:0003700 | F | transcription factor activity, sequence-specific DNA binding |
GO:0005488 | F | binding |
GO:0005623 | C | cell |
GO:0005634 | C | nucleus |
GO:0043231 | C | intracellular membrane-bounded organelle |
GO:0006355 | P | regulation of transcription, DNA-templated |
GO:0007275 | P | multicellular organism development |
GO:0009653 | P | anatomical structure morphogenesis |
GO:0008150 | P | biological_process |
GO:0009791 | P | post-embryonic development |
GO:0009889 | P | regulation of biosynthetic process |
GO:0009908 | P | flower development |
GO:0009934 | P | regulation of meristem structural organization |
GO:0010468 | P | regulation of gene expression |
GO:0010556 | P | regulation of macromolecule biosynthetic process |
GO:0044212 | F | transcription regulatory region DNA binding |
GO:0019219 | P | regulation of nucleobase-containing compound metabolic process |
GO:0019222 | P | regulation of metabolic process |
GO:0022414 | P | reproductive process |
GO:0022603 | P | regulation of anatomical structure morphogenesis |
GO:0031323 | P | regulation of cellular metabolic process |
GO:0031326 | P | regulation of cellular biosynthetic process |
GO:0032501 | P | multicellular organismal process |
GO:0032502 | P | developmental process |
GO:0043226 | C | organelle |
GO:0043227 | C | membrane-bounded organelle |
GO:0043229 | C | intracellular organelle |
GO:0043565 | F | sequence-specific DNA binding |
GO:0044424 | C | intracellular part |
GO:0044464 | C | cell part |
GO:0048367 | P | shoot system development |
GO:0048437 | P | floral organ development |
GO:0048444 | P | floral organ morphogenesis |
GO:0048509 | P | regulation of meristem development |
GO:0048608 | P | reproductive structure development |
GO:0048731 | P | system development |
GO:0048856 | P | anatomical structure development |
GO:0050789 | P | regulation of biological process |
GO:0050793 | P | regulation of developmental process |
GO:0050794 | P | regulation of cellular process |
GO:0051171 | P | regulation of nitrogen compound metabolic process |
GO:0051252 | P | regulation of RNA metabolic process |
GO:0051302 | P | regulation of cell division |
GO:0060255 | P | regulation of macromolecule metabolic process |
GO:0061458 | P | reproductive system development |
GO:0065007 | P | biological regulation |
GO:0080090 | P | regulation of primary metabolic process |
GO:0090567 | P | reproductive shoot system development |
GO:0097159 | F | organic cyclic compound binding |
GO:0099402 | P | plant organ development |
GO:1901363 | F | heterocyclic compound binding |
GO:1903506 | P | regulation of nucleic acid-templated transcription |
GO:2000112 | P | regulation of cellular macromolecule biosynthetic process |
GO:2001141 | P | regulation of RNA biosynthetic process |
GO:0090696 | ||
GO:0090697 | ||
GO:0090698 | ||
GO:0140110 | ||
GO:1905392 |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
K21776 | LIN54; protein lin-54 | EC:- | Cellular senescence | ko04218 |