Detail information of g97004


Location
GeneChrStartEndStrand
g97004Scaffold_37754:HRSCAF_40941911827171185974+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrQFE32168.16.1e-60nuclear transcription factor Y
SwissprotQ93ZH2.24.6e-36Transcriptional activator HAP2C
trEMBLA0A5J6SCZ94.4e-60Nuclear transcription factor Y subunit

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G72830.151.581e-37 153ATHAP2C;HAP2C;NF-YA3nuclear factor Y, subunit A3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag97004.t1
Allium fistulosumAfisC8G00650
Allium sativumAsa1G04264.1
Arabidopsis thaliana
Oryza sativaLOC_Os03g07880.1; LOC_Os03g07880.2; LOC_Os03g07880.3; LOC_Os07g41720.1; LOC_Os07g41720.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02045.12CBFB_NFYAFamily16121694.73.5e-27

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K01883CARS, cysS; cysteinyl-tRNA synthetaseEC:6.1.1.16 Aminoacyl-tRNA biosynthesisko00970
K08064NFYA, HAP2; nuclear transcription factor Y, alphaEC:- Antigen processing and presentationko04612

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.