result

Gene information

Detail information of g98395

Location

Gene	Chr	Start	End	Strand
g98395	Scaffold_37938:HRSCAF_414221	300400	306701	+

Sequences

CDS

Protein

Gene

>g98395.t1
ATGAACGCAAGTGGGTCCCACATGTCAGTGCAAACTTCCAAAAGTACGTCCAAAACTGCAGCTTGCGAATCAATGCTCTCCTCTGAAAATCTTTATGCTCCCCTCTGCTCCCTTCTCAACCTTAAAATCCCAACAAACAAAAAAGCGAGCATCGACTCAATACACATGGCCTTATCGAATCAGCTTCTTCAGTTCCCTTATCCCCCCACTCAATTTACACGAAGAGCCCCTCAAATATGCTACAGTTACCAACCATGCCCATCTTCGAATCCCCGCCGTTCGATCAGATGCTCTTCCTCGTCCAACGGCCGCCCGCCCGAGTCTTCAGGCCTCTCTTCCAACGACGCCGTTAAGGACGATGGGCGGCTGGCTGAGGAGAAGCGTCGTGCTGAGCTTGCTGCACGTATTGCTTCCGGCGAGTTCACCGTCAGCCAGTCAGGGTTCGACACTTACTCTCATTATTATTGTTGTTCCTGTAATGGTCTAATTGCAAAAGCCCCTTGTAGGTTACCTCAATTCACCTAAAAGTTAACGTGCACTACAGAAATGAATTAAAGGTTTATGAAATTGGAGTTTTTAGTTTAAAATTTTTGATATTTGACGATTTTATAGATTGGTTCGGACAATATTGTCGAAATTAGGCCCTGCTGGGAAGCTTTTACAGAGGTTGGTTTCGAGGCTTGGGGAAGGTGGGAGCGATAAGCTGGAGATTCCACAAGCAAGAGGATCTATAGCTGCTGTAGGAAGTCAAGCCTTTTTTATTCCGCTTTATGATCTCTTTCTCACTTATGGTGGTATCTTTCGCCTTAATTTTGGACCAAAGGTACTAATGTGCATCCTTTTTTCTTCGTTTTTTAGTGCTATGGATTGATAAAATAATGGTCCGGAATCACCATTGAATTCAAATAAAGTAAAAAGGTAGAACTAAAATTTTCAAATCTTGATGTACTCCAGGGGGTTGGACAGTGGTAATGTCATTAAGTTCTATGTTATAGCATATACAATAACTAGAAACATTTTCTGTTAAAAACAAAAGTCTCTCAAAGGATAATAAAGATGAAACTAAAAATTTCAATTGCTATGAGTTTAATGCATTATAAAAAGCTATAAGTTATCCCAATTCTTATAATGGAGTTATGTTACTCCAGCAATTAGTATAAAGAACAAGTCAACCCCACAGAACGTAGATGTGTGCGTTTACATTTATAGCGGTAGAATTCGATTGAGAAACCTTTAATAGCATATTTGGTAGAGGACACACTGAACATAAAATCTAGAAAGAAATTGTTAGAGATGATACCGGAATTTGTGAAGAAGCGTCGCCATTGGAGAAGCTTCAAGGAGGAACTCCAAATCCAAAGTCACGTTGCTGAAGCAAAGCGGAGGAGGAAGAGTTCGTTCGGTAGAAGATGCTGAACCAAGTATTTGGTTCGGTGGAGGAGATGTCGGACCAAAGATTTGGTCCGGTGGAGTTCGTTCGGTGACAATGTGGAAAACCGGACTAGAATTTTGGTTCGGTAGTAGTGCTTCGATCGGCAGTGAAGGCAACAAGAAGTTTCGTTCGGTGATGGGTAATACCCGACCAAAGATTTGGTCCGGTGGTGATTTGGTTCGGTGGCCAGTGCAATGCTTGCATGGAAGAATGGATAATGCCGAACGAAATATCTCGTTTGGTATTTGGACATGCCGGACCAAAACCATGTAGAAGGCCGAACCAAATATTTGGTTCGATGTTAGAGCTGTGCTGGACTAGATGCATGCTGAACCAAAAATACCGCTCCAGATGTTTGGTTCGGAAATAGGACTTTGGCGGTCCAGATGGATGCCGAATCCTTTTTTGGTGTTTTGTCGAACCAAATGTCATTATGCTGCTTGCCGACCAGATGTGCCGAACCAAAACCCAGAGCTGCTATATAGCAGCTATCTCTTCTCATATCTTTACTCTATATATAGTGGAGCTTCTGAGCAACAATGGCAGCCATCCTAGAGAGTTGAAACTCTGCATAATTTTGTCTACATTGTAAATTCTTCTTATGTATAGCCTTTAAAAGTGAATCAATCTTGTAACTCTAATCTTTCAGAGATTAATAAAATCTCATTTTTCAAGTGGACGTACATTGTCTCGCGGTAGTGGAACCACTATAAATACTGGTGTTATTTATTTTTCTGCATTGCATTGATCTGTGACCATCTGTTTTGGTATTTATCTCTGTTTATATCATCTCATTACAATCACGATCCAGTTGTTTTCTGCTGCGTTGGGTTTTTTATTCCTTTAGACTGATCATCTGAAGGGATTTTCCCCAACAGAAATGTATATCAGATTTCAATATTACCGCTTTGCTGATCAGTTCAACTATGGATTCTTAACAGTCATTCTTGATTGTATCTGATCCAGCAATAGCTAAACACATACTGAAGGATAATTACAAAGCTTACTCCAAGGTACAGTCTCTTATCTACAGTGTTTGTGTGAAATATGAGTAATTCTTATGTCAGTAAACGGTATACAGGGGATATTAGCAGAAATTTTAGAATTTGTGATGGGAAAAGGTCTGATTCCAGCAGATGGTGAGATTTGGCGAGTTAGGAGGCGAGCAGTTGTACCAGCATTGCATCAAAAGGTCTTTTCCTTATTTTCTTATTCTTTACTTTTGTTATATGTAAGCACAGACTGATGAATCTAACGTCTTATTTTTTTTTTCATAATCATTCATTGTAGTATGTGGCTGCAATGATAGGTCTTTTTGGAAATGCTTCATATAGACTATGTGAAAAATTAGAAGCTGCCGCAACTGATGGAGAAGATGTAGAAATGGAATCTCTTTTCTCAAGATTGACTTTAGATGTTATTGGTAAAGCGGTTTTCAATTACGAGTTTGATTCATTGTCAGTTGATAATGGAATTGTAGAGGTATTCTTTTTATTTCAAATAAATTCTTCTTTCCACGATAAAAACAAAAGGTTTAGAGAAAAATTATAGTATTATGTACTAGAAAAAAGCAAGTTCTATATATTTCTGGTGTTTATTGGAAAAAATATAATGTTACAGTTTTAATCATGTTCAAGTTAAAGCTATTAAACATATATTAGCATGATTTTCCTGAATGATCAGGCTGTTTATACTGTTTTGAGAGAAGCTGAGATGCGAAGTACTTCTCCAATACCAACTTGGGAGATTCCAATATGGAAAGATCTCTCTCCTCGACAAAGAAAAGTTAATGAAGCTCTTGCTTTGATTAACAAAATACTTGATGAATTGATTGCAATTTGCAAGGTACTTGGGCATATAAATTGCACATACTTGCTTAAAGATGACCGATGCATGCATTATAATCTTGTTCTCCTATTCTCAGAAAATGGTGGATCAAGAAGAACTGCAATTTCATGAAGAGTACATGAATGAGCAGGATCCTAGCATTCTACATTTTTTGTTGGCATCCGGAGATGATGTATGGATTCTTTCTATAGGATAAATTCCTCTCCATAACACCAATAAGCACTTCTAATTTATGTGTCCTTTCTTACTTTCCCAGGTTTCTAGCAAACAGCTACGTGATGATTTAATGACAATGCTTATAGCTGGTCATGAAACATCTGCTGCAGTGCTTACATGGACGTTTTATCTTCTAAGTAAGGTACTTACATGTTCTTACCATTGTGTTTCTAGTGTGTTGGTTTACTGGAACGTGTACCGACATTGTAATCTTGTAAATATATGTTCTCAATATTAATTCCATCTCTCTTGTCAATATATTCTTCAGGAGCCTAGTGTTATGGCAAAACTTCAAGAAGAGGTTTGCAGTTAATAATCCTGTACTGTATCATTATATTTTTACCAATGTACAACTACATTGTTTACCAATGCAAACTGTGTCAATGTTTTCTTGTGTTAGGTTGACAATGTCTTGGGGGACCAATTTCCAACTATTGAAGACATGAAAAAGCTGAAGTACACTACTCGAGTGATTAATGAAGTGAGATATTTCTTCTACTTGTTATATTGAAATATCATCCTTTAAATCTTTGTTTCCATTACTTATTGATTTACTTGTAGTCATTAAGACTCTATCCACAACCACCTGTTTTGATTCGTCGCTCTATGGAGGATGACGTGCTTGGGAAATATCCCATAACTAAGTGAGCGTTGGTACTCTTTCATGGATAGTTGTGTTTTAAGTTTCATTGAATGATGTTGTTCAATTTGTCATAGGGGTGAAGATATATTCATCTCTGTATGGAACCTTCACCATTGTCCTAAACACTGGGAAGATGCTGAAAAATTCAATCCTGAAAGATGGCCACTTGATGGTCCAAATCCAAATGAAACAAATCAAAATTTCAGGTTTGCATATTCTAGTCTATGGCTGTGGAGCAAGTTTCTGGTGTATTATCAAAATAATCCCTTGTTTTAATAGTTAACAAACCAAAATTCCAAATCTATCCCTCTCACCCTCCCAGTTTAAAATATGCGTTGCCTCCCTGTTGCTCGTATCTCTACTATTCAAATCACCACTTCTACATCACAAACTTTTTCTCTTATCTCTCGAATATGCATTTTACAACGAGATCAACTATTGTAAATTCACCTGGTTGCTCTGTGGCAACTTTTAGGTATTAGTATCCTAAAATCTAATGCTCTAATAATGATAAAATTTGGATGATGATCTTGGCCAAAAGTTCCAACACTTCCCTTTTATATAAAAATATATAATAATCACATATATGGTAAATTATAACATAAATTATGTAATTATAAAAACTGTATTTTATGTTGCTTTGTTTTATTCAAAAAAAATAATATAAAAAAATACATGTTATAAAAAGCGGTGTGTTTTGTGTGAATTTATAAAATAGTGAGGAGCCCTTTTTTTTTTTTCATTTACTCTTGGTTGGGTCTTTCATAACTCTACTGATAGTAAGTTGGAAAATTTGTTTTTTCCCCAGTGATAACCCTTCTGTATTTATGAAATAAAAAAGCTATTATTTTTAATGCATTATTCACCTATGGGCAGTGTATAAAATTAAGTTATATGAAAGCTAATTAATATAGGAAAGAAAAATGAAAAGGGGTCCATGTCATTTATATTAAACACAATGGAAACTAAAATACATGGGTAATGGGAATTTATTTTACTTTTAAGCTCTTTGATTTTAAATACTTACATAGAAGAATTGTGTATCATGATTATCGTTTTTATCGAAAATTTATTCATAATTTTTTCTATTAATGAAAATATTGAACAATTGGATTTTGCATCATGGTAACATTATCCATAGTATTTCCACCAGTTGAAATATCGATCTTGGAAATGACCTTAGAATATATACAAACTTGACTTATTAACCCAATCGATATGAAGGTTTGCCTTACTGTAAATTTGTAAACTAAATAGTTTGAAATCAAAATAATTGTTTTCTTCTCTTCCTACTGATAACGTGTATTCTCTATTTTCTACTCTTTTGCAAATGTATGTTGCCGATTCTTCCACTCTTTGCTTATCATCTTTATAGTGTGTACTGGTTCCTCATATTTTTACTCAAGAGATACCATCATATTATGTATCTACATTCATTCAAAAGGTAATGAAAACCTTCTATTTGTAGCTGGAACCTAAAACTTGCATAACAGTGTGTACTTGTAAAACATTTCAGTTATTTACCGTTCGGTGGAGGGCCAAGGAAATGTGTAGGAGACATGTTTGCTACATTCGAGGTACTGTTTAATTTATTTTTAGGCCATGGTGTTCATAAGGAAAGTGGAAAAGGAGAATAACATGCATCCTTAATCTTTCTTCTTGTAACATCCTTGATTTTTCACAGACGGTAGTAGCAACAGCAATGCTAGTGAGACGATTTGACTTCAAGATGGCTCTTGGAGCTCCTCCTGTATGGCTTTTATACATTCTTATTTTTATTTTTATTTTTTGTTATTATCCAGATACAAAATAGTATTAGAGAAATTTTTTCAGACACCCTTTTACAAGGTTCAAGAAACAATTAAACTTTGAATTATTTTCGGAAAAGTTTACAGTCTTTTTGCAAAACAAATATTTTTGGGTTTTGATATCTATCTGATGACTTTGTATCAAATGTTCATGCAGGTGGAGATGACTACAGGGGCAACGATTCACACAACAGAGGGACTACAAATGACTGTAACTCGAAGAAGAACGTCTGTTCCTGTAACTCCAAATTTGGAAACAGGTACATTTGCTACTTTAAATGGAAGCAACGGCAGTTCTATCCCTTCATATGAAACCAGCCAGCAAGGTGAAATTTCCAACGCTAGCAGTCTCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020276253.1	1.4e-278	LOW QUALITY PROTEIN: protein LUTEIN DEFICIENT 5, chloroplastic
Swissprot	Q93VK5.1	4.7e-239	Cytochrome P450 97A3
trEMBL	A0A5P1FN18	3.5e-268	Uncharacterized protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G31800.1	75.64	0.0	841	CYP97A3;LUT5	cytochrome P450, family 97, subfamily A, polypeptide 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g98395	AT1G31800.1	550	124	4	103	644	35	582	75.64	0.0	841
g98395	AT3G53130.1	480	224	6	163	636	62	539	51.67	9e-141	497
g98395	AT4G15110.1	510	238	10	166	636	71	578	45.29	3e-121	432

Ortholog group

Species	Genes
Allium cepa	g98395.t1
Allium fistulosum	AfisC1G09189; AfisC8G01176
Allium sativum	Asa7G07279.1
Arabidopsis thaliana	AT1G31800.1
Oryza sativa	LOC_Os02g57290.1; LOC_Os02g57290.2; LOC_Os02g57290.3; LOC_Os02g57290.4

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	200	622	300.8	1.4e-89

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0006629	P	lipid metabolic process
GO:0006720	P	isoprenoid metabolic process
GO:0006721	P	terpenoid metabolic process
GO:0008150	P	biological_process
GO:0008299	P	isoprenoid biosynthetic process
GO:0008610	P	lipid biosynthetic process
GO:0009058	P	biosynthetic process
GO:0009507	C	chloroplast
GO:0009526	C	plastid envelope
GO:0009536	C	plastid
GO:0009941	C	chloroplast envelope
GO:0009987	P	cellular process
GO:0010291	F	carotene beta-ring hydroxylase activity
GO:0016108	P	tetraterpenoid metabolic process
GO:0016109	P	tetraterpenoid biosynthetic process
GO:0016114	P	terpenoid biosynthetic process
GO:0016116	P	carotenoid metabolic process
GO:0016117	P	carotenoid biosynthetic process
GO:0016122	P	xanthophyll metabolic process
GO:0016123	P	xanthophyll biosynthetic process
GO:0031967	C	organelle envelope
GO:0031975	C	envelope
GO:0042440	P	pigment metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044249	P	cellular biosynthetic process
GO:0044255	P	cellular lipid metabolic process
GO:0044422	C	organelle part
GO:0044424	C	intracellular part
GO:0044434	C	chloroplast part
GO:0044435	C	plastid part
GO:0044444	C	cytoplasmic part
GO:0044446	C	intracellular organelle part
GO:0044464	C	cell part
GO:0046148	P	pigment biosynthetic process
GO:0071704	P	organic substance metabolic process
GO:1901576	P	organic substance biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K15747	LUT5, CYP97A3; beta-ring hydroxylase	EC:1.14.-.-	Carotenoid biosynthesis	ko00906

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network