Detail information of GWHGAAEX000010/evm.TU.scaffold_0.15
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|313203811|ref|YP_004042468.1| | 1.00E-132 | peptidase m24 [Paludibacter propionicigenes WB4] |
| KOG | KOG2413 | 0 | Xaa-Pro aminopeptidase |
| nr | gi|743760047|ref|XP_010935071.1| | 0 | PREDICTED: probable Xaa-Pro aminopeptidase P [Elaeis guineensis] |
| trEMBL | tr|Q6ZIY1|Q6ZIY1_ORYSJ | 0 | cDNA clone:J013130G17, full insert sequence {ECO:0000313|EMBL:BAH00068.1} |
| TAIR | AT3G05350 | 0 | Metallopeptidase M24 family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000014 | 1037503 | 1123119 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000010
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01321.17 | Creatinase_N | 97 | 206 | 2.30E-13 |
| PF16189.4 | Creatinase_N_2 | 264 | 457 | 7.00E-46 |
| PF00557.23 | Peptidase_M24 | 461 | 675 | 6.00E-41 |
| PF16188.4 | Peptidase_M24_C | 687 | 747 | 9.20E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016787 | Molecular Function | hydrolase activity |
| GO:0070006 | Molecular Function | metalloaminopeptidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.320 |
| SRR2545915 | Juvenile tuber | 15.610 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 10.640 |
| SRR5643514 | five period of Gastrodia elata | 10.720 | |
| SRR5643515 | five period of Gastrodia elata | 11.530 | |
| SRR5643524 | five period of Gastrodia elata | 13.110 | |
| SRR5643525 | five period of Gastrodia elata | 13.920 | |
| SRR5643528 | five period of Gastrodia elata | 17.000 | |
| SRR5643658 | five period of Gastrodia elata | 13.910 | |
| SRR5643659 | five period of Gastrodia elata | 11.170 | |
| SRR5643660 | five period of Gastrodia elata | 12.160 | |
| SRR5643661 | five period of Gastrodia elata | 10.830 | |
| SRR5643662 | five period of Gastrodia elata | 11.820 | |
| SRR5643663 | five period of Gastrodia elata | 12.200 | |
| SRR5643664 | five period of Gastrodia elata | 10.410 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.860 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 9.200 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.000 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 7.130 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.640 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 8.320 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.540 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 7.730 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 6.540 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.080 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.080 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 12.40 |
| Juven | Juvenile tuber | 10.47 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 11.45 | |
| Mother_Juven | Mother tuber of Juvenile | 16.53 |