Detail information of GWHGAAEX000011/evm.TU.scaffold_0.16_evm.TU.scaffold_0.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743791313|ref|XP_010923399.1|1.84E-97PREDICTED: fatty-acid-binding protein 1 [Elaeis guineensis]
Swissprottr|Q9M1X2|FAP1_ARATH1.00E-73Fatty-acid-binding protein 1
trEMBLtr|M0TQQ6|M0TQQ6_MUSAM4.00E-93Chalcone-flavonone isomerase family protein {ECO:0000256|RuleBase:RU361158}
TAIRAT3G631705.00E-73Chalcone-flavanone isomerase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001412314571283242+
Transcript Sequence

Network for GWHGAAEX000011

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16036.4Chalcone_31292632.50E-08
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016872Molecular Functionintramolecular lyase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.410
SRR2545915Juvenile tuber22.980
SRP108465SRR5643513five period of Gastrodia elata21.250
SRR5643514five period of Gastrodia elata21.060
SRR5643515five period of Gastrodia elata19.600
SRR5643524five period of Gastrodia elata18.550
SRR5643525five period of Gastrodia elata26.830
SRR5643528five period of Gastrodia elata27.170
SRR5643658five period of Gastrodia elata30.440
SRR5643659five period of Gastrodia elata21.780
SRR5643660five period of Gastrodia elata19.700
SRR5643661five period of Gastrodia elata24.360
SRR5643662five period of Gastrodia elata33.510
SRR5643663five period of Gastrodia elata31.010
SRR5643664five period of Gastrodia elata32.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.750
SRR6049655Rhizomagastrodiae_C368-T10_good_119.800
SRR6049656Rhizomagastrodiae_C368-T07_good_128.090
SRR6049657Rhizomagastrodiae_C368-T07_good_130.460
SRR6049658Rhizomagastrodiae_C368-T04_good_134.020
SRR6049659Rhizomagastrodiae_C368-T04_good_138.940
SRR6049660Rhizomagastrodiae_C368-T01_good_129.550
SRR6049661Rhizomagastrodiae_C368-T04_good_131.860
SRR6049662Rhizomagastrodiae_C368-T01_good_125.240
SRR6049663Rhizomagastrodiae_C368-T01_good_128.380
SRR6049664Rhizomagastrodiae_C368-T10_good_125.550
SRR6049665Rhizomagastrodiae_C368-T10_good_125.550
SRP279888GastroGastrodia elata tuber 38.56
JuvenJuvenile tuber41.95
Mother_GastroMother tuber of Gastrodia elata 30.78
Mother_JuvenMother tuber of Juvenile 38.60