Detail information of GWHGAAEX000012/evm.TU.scaffold_0.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08599.00E-119Synaptobrevin/VAMP-like protein
nrgi|720077747|ref|XP_010241141.1|1.74E-130PREDICTED: putative vesicle-associated membrane protein 726 [Nelumbo nucifera]
Swissprottr|Q9ZTW3|VA721_ARATH3.00E-119Vesicle-associated membrane protein 721
trEMBLtr|W9S386|W9S386_9ROSA1.00E-129Putative vesicle-associated membrane protein 726 {ECO:0000313|EMBL:EXC24180.1}
TAIRAT1G047509.00E-119vesicle-associated membrane protein 721

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001416112951627025-
Transcript Sequence

Network for GWHGAAEX000012

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13774.5Longin331125.40E-23
PF00957.20Synaptobrevin1302164.70E-33
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0016192Biological Processvesicle-mediated transport
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms71.900
SRR2545915Juvenile tuber86.430
SRP108465SRR5643513five period of Gastrodia elata70.850
SRR5643514five period of Gastrodia elata63.240
SRR5643515five period of Gastrodia elata86.810
SRR5643524five period of Gastrodia elata79.500
SRR5643525five period of Gastrodia elata92.240
SRR5643528five period of Gastrodia elata213.030
SRR5643658five period of Gastrodia elata90.740
SRR5643659five period of Gastrodia elata87.410
SRR5643660five period of Gastrodia elata83.520
SRR5643661five period of Gastrodia elata85.450
SRR5643662five period of Gastrodia elata77.110
SRR5643663five period of Gastrodia elata75.450
SRR5643664five period of Gastrodia elata62.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.060
SRR6049655Rhizomagastrodiae_C368-T10_good_145.250
SRR6049656Rhizomagastrodiae_C368-T07_good_151.520
SRR6049657Rhizomagastrodiae_C368-T07_good_142.840
SRR6049658Rhizomagastrodiae_C368-T04_good_146.440
SRR6049659Rhizomagastrodiae_C368-T04_good_148.460
SRR6049660Rhizomagastrodiae_C368-T01_good_150.000
SRR6049661Rhizomagastrodiae_C368-T04_good_150.310
SRR6049662Rhizomagastrodiae_C368-T01_good_152.570
SRR6049663Rhizomagastrodiae_C368-T01_good_151.850
SRR6049664Rhizomagastrodiae_C368-T10_good_162.510
SRR6049665Rhizomagastrodiae_C368-T10_good_162.510
SRP279888GastroGastrodia elata tuber 82.03
JuvenJuvenile tuber61.84
Mother_GastroMother tuber of Gastrodia elata 154.96
Mother_JuvenMother tuber of Juvenile 120.21