Detail information of GWHGAAEX000013/evm.TU.scaffold_0.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG46722.00E-74Uncharacterized conserved low complexity protein
nrgi|672145485|ref|XP_008796661.1|1.13E-158PREDICTED: vegetative cell wall protein gp1-like isoform X1 [Phoenix dactylifera]
trEMBLtr|M5WBG1|M5WBG1_PRUPE8.00E-143Uncharacterized protein {ECO:0000313|EMBL:EMJ11092.1}
TAIRAT5G626402.00E-74proline-rich family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001417620661798586-
Transcript Sequence

Network for GWHGAAEX000013

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09429.9Wbp117821.20E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006396Biological ProcessRNA processing

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.580
SRR2545915Juvenile tuber20.940
SRP108465SRR5643513five period of Gastrodia elata27.760
SRR5643514five period of Gastrodia elata27.140
SRR5643515five period of Gastrodia elata29.400
SRR5643524five period of Gastrodia elata30.330
SRR5643525five period of Gastrodia elata24.320
SRR5643528five period of Gastrodia elata27.920
SRR5643658five period of Gastrodia elata27.700
SRR5643659five period of Gastrodia elata25.680
SRR5643660five period of Gastrodia elata25.790
SRR5643661five period of Gastrodia elata26.570
SRR5643662five period of Gastrodia elata26.570
SRR5643663five period of Gastrodia elata26.810
SRR5643664five period of Gastrodia elata26.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.710
SRR6049655Rhizomagastrodiae_C368-T10_good_147.030
SRR6049656Rhizomagastrodiae_C368-T07_good_127.380
SRR6049657Rhizomagastrodiae_C368-T07_good_124.260
SRR6049658Rhizomagastrodiae_C368-T04_good_121.620
SRR6049659Rhizomagastrodiae_C368-T04_good_120.700
SRR6049660Rhizomagastrodiae_C368-T01_good_125.120
SRR6049661Rhizomagastrodiae_C368-T04_good_121.830
SRR6049662Rhizomagastrodiae_C368-T01_good_126.690
SRR6049663Rhizomagastrodiae_C368-T01_good_125.310
SRR6049664Rhizomagastrodiae_C368-T10_good_129.890
SRR6049665Rhizomagastrodiae_C368-T10_good_129.890
SRP279888GastroGastrodia elata tuber 20.93
JuvenJuvenile tuber30.62
Mother_GastroMother tuber of Gastrodia elata 25.63
Mother_JuvenMother tuber of Juvenile 26.25