Detail information of GWHGAAEX000016/evm.TU.scaffold_0.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|320160906|ref|YP_004174130.1|6.00E-44major facilitator superfamily transporter [Anaerolinea thermophila UNI-1]
KOGKOG13300Sugar transporter/spinster transmembrane protein
nrgi|672125412|ref|XP_008786124.1|0PREDICTED: uncharacterized protein LOC103704553 isoform X1 [Phoenix dactylifera]
trEMBLtr|C5XDA9|C5XDA9_SORBI0Putative uncharacterized protein Sb02g006340 {ECO:0000313|EMBL:EER98199.1}
TAIRAT4G367900Major facilitator superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001423077532318160+
Transcript Sequence

Network for GWHGAAEX000016

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07690.15MFS_1434073.90E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0005887Cellular Componentintegral component of plasma membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.370
SRR2545915Juvenile tuber30.640
SRP108465SRR5643513five period of Gastrodia elata41.090
SRR5643514five period of Gastrodia elata35.930
SRR5643515five period of Gastrodia elata34.080
SRR5643524five period of Gastrodia elata36.200
SRR5643525five period of Gastrodia elata38.580
SRR5643528five period of Gastrodia elata34.890
SRR5643658five period of Gastrodia elata40.500
SRR5643659five period of Gastrodia elata31.450
SRR5643660five period of Gastrodia elata38.070
SRR5643661five period of Gastrodia elata34.090
SRR5643662five period of Gastrodia elata36.230
SRR5643663five period of Gastrodia elata33.610
SRR5643664five period of Gastrodia elata36.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.210
SRR6049655Rhizomagastrodiae_C368-T10_good_138.310
SRR6049656Rhizomagastrodiae_C368-T07_good_144.160
SRR6049657Rhizomagastrodiae_C368-T07_good_147.310
SRR6049658Rhizomagastrodiae_C368-T04_good_158.620
SRR6049659Rhizomagastrodiae_C368-T04_good_160.410
SRR6049660Rhizomagastrodiae_C368-T01_good_148.120
SRR6049661Rhizomagastrodiae_C368-T04_good_150.570
SRR6049662Rhizomagastrodiae_C368-T01_good_149.760
SRR6049663Rhizomagastrodiae_C368-T01_good_151.770
SRR6049664Rhizomagastrodiae_C368-T10_good_144.570
SRR6049665Rhizomagastrodiae_C368-T10_good_144.570
SRP279888GastroGastrodia elata tuber 32.02
JuvenJuvenile tuber34.71
Mother_GastroMother tuber of Gastrodia elata 34.99
Mother_JuvenMother tuber of Juvenile 26.77