Detail information of GWHGAAEX000022/evm.TU.scaffold_0.50


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743791285|ref|XP_010923390.1|0PREDICTED: uncharacterized protein LOC105046499 [Elaeis guineensis]
trEMBLtr|M0TQQ2|M0TQQ2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P15490_001}
TAIRAT5G504200O-fucosyltransferase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001442515574256969+
Transcript Sequence

Network for GWHGAAEX000022

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10250.8O-FucT2525542.20E-12
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGTnc
Carbohydrate-Active enzymes FamilyGTnc
Carbohydrate-Active enzymes FamilyGTnc

KEGG pathway

KO Enzyme pathway mapID
K03691POFUT Other types of O-glycan biosynthesis map00514

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.060
SRR2545915Juvenile tuber17.650
SRP108465SRR5643513five period of Gastrodia elata18.180
SRR5643514five period of Gastrodia elata15.710
SRR5643515five period of Gastrodia elata20.300
SRR5643524five period of Gastrodia elata17.190
SRR5643525five period of Gastrodia elata14.440
SRR5643528five period of Gastrodia elata20.390
SRR5643658five period of Gastrodia elata23.440
SRR5643659five period of Gastrodia elata21.140
SRR5643660five period of Gastrodia elata20.300
SRR5643661five period of Gastrodia elata21.310
SRR5643662five period of Gastrodia elata15.750
SRR5643663five period of Gastrodia elata16.070
SRR5643664five period of Gastrodia elata11.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.990
SRR6049655Rhizomagastrodiae_C368-T10_good_120.610
SRR6049656Rhizomagastrodiae_C368-T07_good_116.790
SRR6049657Rhizomagastrodiae_C368-T07_good_118.700
SRR6049658Rhizomagastrodiae_C368-T04_good_116.350
SRR6049659Rhizomagastrodiae_C368-T04_good_116.430
SRR6049660Rhizomagastrodiae_C368-T01_good_119.150
SRR6049661Rhizomagastrodiae_C368-T04_good_120.510
SRR6049662Rhizomagastrodiae_C368-T01_good_123.050
SRR6049663Rhizomagastrodiae_C368-T01_good_119.470
SRR6049664Rhizomagastrodiae_C368-T10_good_120.730
SRR6049665Rhizomagastrodiae_C368-T10_good_120.730
SRP279888GastroGastrodia elata tuber 16.09
JuvenJuvenile tuber12.20
Mother_GastroMother tuber of Gastrodia elata 11.47
Mother_JuvenMother tuber of Juvenile 9.62