Detail information of GWHGAAEX000026/evm.TU.scaffold_0.56_evm.TU.scaffold_0.57


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672132335|ref|XP_008789750.1|9.46E-82PREDICTED: zinc finger CCCH domain-containing protein 36-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q75K81|C3H36_ORYSJ4.00E-24Zinc finger CCCH domain-containing protein 36
trEMBLtr|M0SU90|M0SU90_MUSAM1.00E-59Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P33280_001}
TAIRAT3G186402.00E-20Zinc finger C-x8-C-x5-C-x3-H type family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001444574924493427-
Transcript Sequence

Network for GWHGAAEX000026

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC3H

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms52.330
SRR2545915Juvenile tuber45.780
SRP108465SRR5643513five period of Gastrodia elata24.780
SRR5643514five period of Gastrodia elata22.710
SRR5643515five period of Gastrodia elata22.590
SRR5643524five period of Gastrodia elata21.190
SRR5643525five period of Gastrodia elata25.150
SRR5643528five period of Gastrodia elata20.870
SRR5643658five period of Gastrodia elata18.350
SRR5643659five period of Gastrodia elata30.710
SRR5643660five period of Gastrodia elata29.230
SRR5643661five period of Gastrodia elata32.860
SRR5643662five period of Gastrodia elata26.080
SRR5643663five period of Gastrodia elata26.380
SRR5643664five period of Gastrodia elata25.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.080
SRR6049655Rhizomagastrodiae_C368-T10_good_123.180
SRR6049656Rhizomagastrodiae_C368-T07_good_123.900
SRR6049657Rhizomagastrodiae_C368-T07_good_135.140
SRR6049658Rhizomagastrodiae_C368-T04_good_128.210
SRR6049659Rhizomagastrodiae_C368-T04_good_137.000
SRR6049660Rhizomagastrodiae_C368-T01_good_130.510
SRR6049661Rhizomagastrodiae_C368-T04_good_128.490
SRR6049662Rhizomagastrodiae_C368-T01_good_122.340
SRR6049663Rhizomagastrodiae_C368-T01_good_123.400
SRR6049664Rhizomagastrodiae_C368-T10_good_124.090
SRR6049665Rhizomagastrodiae_C368-T10_good_124.090
SRP279888GastroGastrodia elata tuber 20.73
JuvenJuvenile tuber37.88
Mother_GastroMother tuber of Gastrodia elata 16.08
Mother_JuvenMother tuber of Juvenile 28.22