Detail information of GWHGAAEX000033/evm.TU.scaffold_0.70
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
COG | gi|470180859|ref|YP_007566734.1| | 4.00E-16 | Phospholipase/lecithinase/hemolysin [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] |
nr | gi|743758960|ref|XP_010929638.1| | 2.76E-105 | PREDICTED: GDSL esterase/lipase At5g55050-like [Elaeis guineensis] |
Swissprot | tr|Q9FIA1|GDL87_ARATH | 1.00E-68 | GDSL esterase/lipase At5g55050 (Precursor) |
trEMBL | tr|M0RY57|M0RY57_MUSAM | 2.00E-105 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P08490_001} |
TAIR | AT5G55050 | 3.00E-68 | GDSL-like Lipase/Acylhydrolase superfamily protein |
Location And Transcript Sequence
Scaffold | Start | End | Strand |
---|---|---|---|
GWHAAEX00000014 | 5172437 | 5186108 | - |
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Transcript Sequence | |||
Network for GWHGAAEX000033
Network category | Network | Top300 PCC genelist |
---|---|---|
Coexpression Positive | Network | Top300 PCC genelist |
Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
Module ID | Function Annotation |
---|---|
Module2 |
Protein Structure
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
PF00657.21 | Lipase_GDSL | 57 | 357 | 1.20E-13 |
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Protein Sequence |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | pathway | mapID |
---|---|---|---|
-- | -- | -- | -- |
Gene Ontology
GO term | Ontology | Name |
---|---|---|
GO:0016788 | Molecular Function | hydrolase activity, acting on ester bonds |
Expression pattern
SRP | Sample | Description | FPKM |
---|---|---|---|
SRP064423 | SRR2545914 | vegetative propagation corms | 0.290 |
SRR2545915 | Juvenile tuber | 0.000 | |
SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.890 |
SRR5643514 | five period of Gastrodia elata | 1.120 | |
SRR5643515 | five period of Gastrodia elata | 2.020 | |
SRR5643524 | five period of Gastrodia elata | 0.850 | |
SRR5643525 | five period of Gastrodia elata | 0.000 | |
SRR5643528 | five period of Gastrodia elata | 0.180 | |
SRR5643658 | five period of Gastrodia elata | 0.000 | |
SRR5643659 | five period of Gastrodia elata | 0.000 | |
SRR5643660 | five period of Gastrodia elata | 0.000 | |
SRR5643661 | five period of Gastrodia elata | 0.000 | |
SRR5643662 | five period of Gastrodia elata | 0.000 | |
SRR5643663 | five period of Gastrodia elata | 0.000 | |
SRR5643664 | five period of Gastrodia elata | 0.050 | |
SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 12.610 |
SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 24.280 | |
SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.360 | |
SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.530 | |
SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 13.080 | |
SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 8.370 | |
SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.650 | |
SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 6.680 | |
SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.010 | |
SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 11.190 | |
SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 25.880 | |
SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 25.880 | |
SRP279888 | Gastro | Gastrodia elata tuber | 0.02 |
Juven | Juvenile tuber | 0.12 | |
Mother_Gastro | Mother tuber of Gastrodia elata | 0.54 | |
Mother_Juven | Mother tuber of Juvenile | 1.33 |