Detail information of GWHGAAEX000034/evm.TU.scaffold_0.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|220932729|ref|YP_002509637.1|2.00E-38tetraacyldisaccharide 4'-kinase [Halothermothrix orenii H 168]
nrgi|672176711|ref|XP_008808428.1|2.39E-160PREDICTED: probable tetraacyldisaccharide 4'-kinase, mitochondrial isoform X2 [Phoenix dactylifera]
Swissprottr|Q8LEA0|LPXK_ARATH4.00E-130Probable tetraacyldisaccharide 4'-kinase, mitochondrial (Precursor)
trEMBLtr|D7T7Z4|D7T7Z4_VITVI1.00E-143Putative uncharacterized protein {ECO:0000313|EMBL:CBI26653.3}
TAIRAT3G204801.00E-129tetraacyldisaccharide 4'-kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001452776725303251-
Transcript Sequence

Network for GWHGAAEX000034

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02606.13LpxK323781.90E-64
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00912lpxK Metabolic pathways map01100
Lipopolysaccharide biosynthesismap00540

Gene Ontology

GO term OntologyName
GO:0009245Biological Processlipid A biosynthetic process
GO:0005524Molecular FunctionATP binding
GO:0009029Molecular Functiontetraacyldisaccharide 4'-kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.700
SRR2545915Juvenile tuber32.100
SRP108465SRR5643513five period of Gastrodia elata8.560
SRR5643514five period of Gastrodia elata10.360
SRR5643515five period of Gastrodia elata11.220
SRR5643524five period of Gastrodia elata9.180
SRR5643525five period of Gastrodia elata15.330
SRR5643528five period of Gastrodia elata8.790
SRR5643658five period of Gastrodia elata16.830
SRR5643659five period of Gastrodia elata3.490
SRR5643660five period of Gastrodia elata5.490
SRR5643661five period of Gastrodia elata5.650
SRR5643662five period of Gastrodia elata3.430
SRR5643663five period of Gastrodia elata3.660
SRR5643664five period of Gastrodia elata3.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.200
SRR6049655Rhizomagastrodiae_C368-T10_good_117.240
SRR6049656Rhizomagastrodiae_C368-T07_good_113.150
SRR6049657Rhizomagastrodiae_C368-T07_good_113.070
SRR6049658Rhizomagastrodiae_C368-T04_good_115.780
SRR6049659Rhizomagastrodiae_C368-T04_good_118.530
SRR6049660Rhizomagastrodiae_C368-T01_good_113.540
SRR6049661Rhizomagastrodiae_C368-T04_good_114.400
SRR6049662Rhizomagastrodiae_C368-T01_good_113.080
SRR6049663Rhizomagastrodiae_C368-T01_good_110.010
SRR6049664Rhizomagastrodiae_C368-T10_good_18.740
SRR6049665Rhizomagastrodiae_C368-T10_good_18.740
SRP279888GastroGastrodia elata tuber 8.64
JuvenJuvenile tuber11.83
Mother_GastroMother tuber of Gastrodia elata 4.78
Mother_JuvenMother tuber of Juvenile 14.55