Detail information of GWHGAAEX000035/evm.TU.scaffold_0.73


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04695.00E-11Elongation factor 2
nrgi|10798636|emb|CAC12818.1|3.26E-11elongation factor 2 [Nicotiana tabacum]
Swissprottr|O23755|EF2_BETVU2.00E-11Elongation factor 2
trEMBLtr|Q9FEL2|Q9FEL2_TOBAC1.00E-11Elongation factor 2 {ECO:0000313|EMBL:CAC12818.1} (Fragment)
TAIRAT1G560755.00E-11Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001454023475404782+
Transcript Sequence

Network for GWHGAAEX000035

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03234EEF2 AMPK signaling pathway map04152
Oxytocin signaling pathwaymap04921

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms85.090
SRR2545915Juvenile tuber71.780
SRP108465SRR5643513five period of Gastrodia elata61.970
SRR5643514five period of Gastrodia elata47.330
SRR5643515five period of Gastrodia elata42.570
SRR5643524five period of Gastrodia elata42.770
SRR5643525five period of Gastrodia elata157.420
SRR5643528five period of Gastrodia elata40.390
SRR5643658five period of Gastrodia elata122.810
SRR5643659five period of Gastrodia elata54.010
SRR5643660five period of Gastrodia elata65.140
SRR5643661five period of Gastrodia elata57.370
SRR5643662five period of Gastrodia elata56.200
SRR5643663five period of Gastrodia elata67.350
SRR5643664five period of Gastrodia elata81.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_161.330
SRR6049655Rhizomagastrodiae_C368-T10_good_1102.040
SRR6049656Rhizomagastrodiae_C368-T07_good_145.500
SRR6049657Rhizomagastrodiae_C368-T07_good_152.250
SRR6049658Rhizomagastrodiae_C368-T04_good_145.250
SRR6049659Rhizomagastrodiae_C368-T04_good_143.060
SRR6049660Rhizomagastrodiae_C368-T01_good_139.880
SRR6049661Rhizomagastrodiae_C368-T04_good_137.230
SRR6049662Rhizomagastrodiae_C368-T01_good_143.880
SRR6049663Rhizomagastrodiae_C368-T01_good_131.490
SRR6049664Rhizomagastrodiae_C368-T10_good_149.410
SRR6049665Rhizomagastrodiae_C368-T10_good_149.410
SRP279888GastroGastrodia elata tuber 54.05
JuvenJuvenile tuber106.38
Mother_GastroMother tuber of Gastrodia elata 75.46
Mother_JuvenMother tuber of Juvenile 80.71