Detail information of GWHGAAEX000039/evm.TU.scaffold_0.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|159042302|ref|YP_001541554.1|5.00E-42metallophosphoesterase [Caldivirga maquilingensis IC-167]
KOGKOG03710Serine/threonine protein phosphatase 2A, catalytic subunit
nrgi|743759930|ref|XP_010934485.1|0PREDICTED: serine/threonine-protein phosphatase PP2A-2 catalytic subunit isoform X1 [Elaeis guineensis]
Swissprottr|Q9XGH7|PP2A_TOBAC0Serine/threonine-protein phosphatase PP2A catalytic subunit
trEMBLtr|V7CMH5|V7CMH5_PHAVU0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}
TAIRAT2G425000protein phosphatase 2A-3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001454638355482876+
Transcript Sequence

Network for GWHGAAEX000039

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00149.27Metallophos552462.30E-35
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04382PPP2C mRNA surveillance pathway map03015
MAPK signaling pathway - flymap04013
TGF-beta signaling pathwaymap04350
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Autophagy - animalmap04140
Autophagy - yeastmap04138
Autophagy - othermap04136
Cell cycle - yeastmap04111
Meiosis - yeastmap04113
Oocyte meiosismap04114
Tight junctionmap04530
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728
Long-term depressionmap04730

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms139.000
SRR2545915Juvenile tuber156.170
SRP108465SRR5643513five period of Gastrodia elata73.280
SRR5643514five period of Gastrodia elata64.510
SRR5643515five period of Gastrodia elata67.800
SRR5643524five period of Gastrodia elata62.280
SRR5643525five period of Gastrodia elata82.490
SRR5643528five period of Gastrodia elata63.890
SRR5643658five period of Gastrodia elata78.390
SRR5643659five period of Gastrodia elata80.720
SRR5643660five period of Gastrodia elata82.480
SRR5643661five period of Gastrodia elata78.190
SRR5643662five period of Gastrodia elata74.780
SRR5643663five period of Gastrodia elata85.890
SRR5643664five period of Gastrodia elata82.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_198.810
SRR6049655Rhizomagastrodiae_C368-T10_good_1106.000
SRR6049656Rhizomagastrodiae_C368-T07_good_192.200
SRR6049657Rhizomagastrodiae_C368-T07_good_1103.280
SRR6049658Rhizomagastrodiae_C368-T04_good_178.420
SRR6049659Rhizomagastrodiae_C368-T04_good_192.030
SRR6049660Rhizomagastrodiae_C368-T01_good_191.370
SRR6049661Rhizomagastrodiae_C368-T04_good_189.420
SRR6049662Rhizomagastrodiae_C368-T01_good_165.600
SRR6049663Rhizomagastrodiae_C368-T01_good_173.160
SRR6049664Rhizomagastrodiae_C368-T10_good_177.230
SRR6049665Rhizomagastrodiae_C368-T10_good_177.230
SRP279888GastroGastrodia elata tuber 94.65
JuvenJuvenile tuber106.73
Mother_GastroMother tuber of Gastrodia elata 81.26
Mother_JuvenMother tuber of Juvenile 111.61