Detail information of GWHGAAEX000054/evm.TU.scaffold_0.99


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672184690|ref|XP_008812625.1|8.21E-25PREDICTED: uncharacterized protein LOC103723486 [Phoenix dactylifera]
trEMBLtr|M0SUB2|M0SUB2_MUSAM2.00E-23Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P33500_001}
TAIRAT4G219302.00E-13Protein of unknown function, DUF584

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001469187766919540-
Transcript Sequence

Network for GWHGAAEX000054

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04520.12Senescence_reg751487.60E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.090
SRR2545915Juvenile tuber0.670
SRP108465SRR5643513five period of Gastrodia elata3.230
SRR5643514five period of Gastrodia elata6.310
SRR5643515five period of Gastrodia elata6.250
SRR5643524five period of Gastrodia elata9.540
SRR5643525five period of Gastrodia elata1.310
SRR5643528five period of Gastrodia elata3.270
SRR5643658five period of Gastrodia elata0.890
SRR5643659five period of Gastrodia elata4.620
SRR5643660five period of Gastrodia elata1.380
SRR5643661five period of Gastrodia elata3.960
SRR5643662five period of Gastrodia elata6.250
SRR5643663five period of Gastrodia elata0.970
SRR5643664five period of Gastrodia elata7.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.570
SRR6049655Rhizomagastrodiae_C368-T10_good_11.230
SRR6049656Rhizomagastrodiae_C368-T07_good_16.260
SRR6049657Rhizomagastrodiae_C368-T07_good_114.170
SRR6049658Rhizomagastrodiae_C368-T04_good_120.830
SRR6049659Rhizomagastrodiae_C368-T04_good_122.510
SRR6049660Rhizomagastrodiae_C368-T01_good_110.720
SRR6049661Rhizomagastrodiae_C368-T04_good_113.170
SRR6049662Rhizomagastrodiae_C368-T01_good_14.810
SRR6049663Rhizomagastrodiae_C368-T01_good_19.190
SRR6049664Rhizomagastrodiae_C368-T10_good_10.870
SRR6049665Rhizomagastrodiae_C368-T10_good_10.870
SRP279888GastroGastrodia elata tuber 4.04
JuvenJuvenile tuber3.28
Mother_GastroMother tuber of Gastrodia elata 33.73
Mother_JuvenMother tuber of Juvenile 12.57