Gene detail

Detail information of GWHGAAEX000056/evm.TU.scaffold_0.105

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672172605\|ref\|XP_008806402.1\|	0	PREDICTED: uncharacterized protein LOC103719104 [Phoenix dactylifera]
Swissprot	tr\|Q66GQ2\|Y5162_ARATH	2.00E-15	Uncharacterized protein At5g41620
trEMBL	tr\|A0A067KSK8\|A0A067KSK8_JATCU	1.00E-135	Uncharacterized protein {ECO:0000313\|EMBL:KDP39127.1}
TAIR	AT1G50660	3.00E-114	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000014	7085586	7088784	+

Transcript Sequence
>GWHTAAEX000056 CTCGGCCCAAACATACACACCCAGTGACCTCGAAAACAAGTCACCACTACGATGATGGCGGCCGAGTGTCCAGTGCGATGACTGAACCAGGAAGCCGGAATTGCTTACTGGCAAAAACTCCCGTGCGGTTCTCTTCTTCAGCTTCAGGAGCATTATCAGACAGGCTCCGCCGTGGTCGTCGCCGTCGCCGGCGGAGCCTGAATCTCTTTCTTATTGACACTGACCGCGGAGGTGGCAGCAGAATAGAAAGCATCCCTGACACTCCTTTCCTCCATTGGAAGTTCAACGAAGATGGACCACGTTTCGGAGAACCGCAGCTTGAGCTAGGCGATGAAACCCTAAGGAAGTCCAGAATACCAGCGGGTGATCGTCGGTCGTCCGCTTCAGCAAGGAATCTTGCTGCGCAAATCTGGAACATCCGCTTCCCGAAAGTCGTCTGCGGAAACGAAGCAAATTTGGATTTGCAGACAAGTGGCAACTGCTTCAATCTCCATTATGATACCAATGAACGTTTCAAATGCTTTTGTGCTGCTAGAAAACGCAGGAATGCAGTTTGTACAAAGCTTGAAACTGCCGCTTCATTGCTCCCTTCCTCTAGAGAGACAACTACAAATTCGATCTCTCGTTATCAAAATGGGCCTAAAGTCGCGTTGAACTTGTATGATAATTTGAACCTTCACGAAGAACAAACAACTGACTTGTTCTCTATTGTTTCTGGTCTCCGATCAGAACTTGAACTGGCTCAGTTCAAAGTCAATGAGCTTGAAGCAGAGCGGCAATATGCTAAGAAAGAGCTTGATCACTTCATAAGGAAATTTGAAGAGGAGAGAGTTGTATGGAGAAGAAGAGAGCATGAACAGATCAGGTCTATTAATGCAATGAAAGAAGATCTGAAGCGAGAGAGGAAGGCTGCTCGGAGATTCCAAGTTATGAATGCTAAGCTTATTAGTGAGCTTACTGAGGCTAAACAATCTTCCGAGCAGTATTTACTAGAGTATGAGAAGGAGAGGAAGAACAGTGAGCTTTTGGAGGAAATTTGCAATGAGCTGGCTACAGAAATTGGTAATGACAAGGCACTGGTCGAGGCATTGAAGATAGAGTCAGTGAGGGAAAGAGAAGAAGTGGAAGAGGAGCGAAAGATGTTGCAAATGGCAGAGGTATGGCGGGAAGAAAGGGTACAGATGAAGTTAATTGATGCAAAACTAACACTTGAGGAGAGGTATTCGAAGTTAGTCAAGTTGCAGGAGGAGATAGAAAATTTTCTTAAATCTAGAAGTGGCAACAATGGCAATGCTTATGACACTAAGCATGCAAAAACACTTAAAGAGGCTATTGAATCAGTCAAAACTCAGGGTAAGATAGAGTTTTTATATCAGACTCCGCCTTCTCCAGATGGCATTTATTCTTTCTTTGAAGAGAAGCAGTCAAGAAAACAGATTAATGCAAGGGAAATTGCACAATCCTATCACTCTGTGACCCCTGTGGCAAATGGATTTTCAGAGAAAACCATGAAGAGGTACGACAATGTGATGTTTGACGGAAATTGTGATGTTAATGATGATAGTGGGTGGGAAACAGTGAGTCGTGTGGAGCAGGAATCCTGCAAGTCATCTGATCGAAGTGAACCATCTGTTAATGGAGCGTATGCAGAGAGTCAAGCTTCAGTTAGCGGAACCGATTATGATGAGCATAGAAATGACAAGAAACTAAATAGCGAAATCAGTGAGGTTTGCTCGGCAACAACGAGGCTATCAAGAAAGAAAGGTTCTTTATCTTGGCTTTGGAAGACATCACGTGCAACTGATGGTGAGGATTTGAAGAAGATAGCTTTTGAGTTAACCAATGGGAGGCTTTGCAGCGGTAGGTCCCTTTCTCCTGCACAAAATTCTACTGAAACAGGCTTGAGTTCCCTAGGTGTTTGTAATTGGACATCCCCTGATTGGTTGAACTCCCATATCGCCAATGAGAAGAAAGGCCGTGTTGAATGGCCACATTCTGCAATGCAGCAAAGCTTAAAGGCAAAGCTCATGGAGGCAAGAATTCAAAATCAGAGAGTTCAGCTTCGTCATGTCCTCAAACAGAAAATTTAAGGCTTTTGTTTGCTGCAGATGGAATTCTAGGATGGAGACGTTCAAATGTTTAGACTTAGCCCGTATATCATTTTGAACAGGTGCATGCCTTCTGAATCATTTCTATACGCAGTTATTAGACAATTGCTGCAGGTGGGTTGGTATTGGTAATTTTCTATTTTAGAATTTAAAAACCTCTTTTTCATGCAATTTTTGCATGTTAAGCATTAAGCTGTAACTTTATTTATTTAGTATATAAATGATTGTCGGAAATTAGCAGTGCAATTATGAATTTTAATAATTATGTCAAATTTAGTATACTTAACTATTTGTAATCTGTTACTGTGGCTTGGTAGATGCACTCATTAAGCGTTTTCTGAATAGCGTGAATGCCATGACAACTTTATCATTACTTAAAAGGCTATCAAGATAGCCGAATCATTATATTTTTC

Network for GWHGAAEX000056

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	45.660
SRP064423	SRR2545915	Juvenile tuber	46.160
SRP108465	SRR5643513	five period of Gastrodia elata	34.750
	SRR5643514	five period of Gastrodia elata	29.200
	SRR5643515	five period of Gastrodia elata	26.250
	SRR5643524	five period of Gastrodia elata	29.050
	SRR5643525	five period of Gastrodia elata	20.910
	SRR5643528	five period of Gastrodia elata	18.050
	SRR5643658	five period of Gastrodia elata	18.970
	SRR5643659	five period of Gastrodia elata	27.060
	SRR5643660	five period of Gastrodia elata	29.130
	SRR5643661	five period of Gastrodia elata	27.880
	SRR5643662	five period of Gastrodia elata	18.120
	SRR5643663	five period of Gastrodia elata	23.230
	SRR5643664	five period of Gastrodia elata	20.200
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	31.950
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	31.570
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	31.240
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	35.470
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	26.140
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	31.680
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	32.120
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	31.350
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	25.250
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	26.560
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	29.140
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	29.140
SRP279888	Gastro	Gastrodia elata tuber	17.87
	Juven	Juvenile tuber	44.05
	Mother_Gastro	Mother tuber of Gastrodia elata	17.27
	Mother_Juven	Mother tuber of Juvenile	26.55