Detail information of GWHGAAEX000057/evm.TU.scaffold_0.108
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|357387774|ref|YP_004902613.1| | 5.00E-18 | putative phosphodiesterase [Kitasatospora setae KM-6054] |
| KOG | KOG1378 | 0 | Purple acid phosphatase |
| nr | gi|672167353|ref|XP_008803634.1| | 0 | PREDICTED: purple acid phosphatase 18-like [Phoenix dactylifera] |
| Swissprot | tr|Q9LJU7|PPA18_ARATH | 0 | Purple acid phosphatase 18 (Precursor) |
| trEMBL | tr|M0TB85|M0TB85_MUSAM | 0 | Purple acid phosphatase {ECO:0000256|RuleBase:RU361203} |
| TAIR | AT3G20500 | 0 | purple acid phosphatase 18 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000014 | 7109671 | 7121994 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000057
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF16656.4 | Pur_ac_phosph_N | 51 | 138 | 1.90E-18 |
| PF00149.27 | Metallophos | 145 | 336 | 4.10E-22 |
| PF14008.5 | Metallophos_C | 352 | 409 | 2.00E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0003993 | Molecular Function | acid phosphatase activity |
| GO:0016787 | Molecular Function | hydrolase activity |
| GO:0046872 | Molecular Function | metal ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 53.770 |
| SRR2545915 | Juvenile tuber | 58.150 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 51.580 |
| SRR5643514 | five period of Gastrodia elata | 37.780 | |
| SRR5643515 | five period of Gastrodia elata | 51.760 | |
| SRR5643524 | five period of Gastrodia elata | 45.920 | |
| SRR5643525 | five period of Gastrodia elata | 129.720 | |
| SRR5643528 | five period of Gastrodia elata | 113.970 | |
| SRR5643658 | five period of Gastrodia elata | 131.570 | |
| SRR5643659 | five period of Gastrodia elata | 43.770 | |
| SRR5643660 | five period of Gastrodia elata | 44.820 | |
| SRR5643661 | five period of Gastrodia elata | 48.780 | |
| SRR5643662 | five period of Gastrodia elata | 50.690 | |
| SRR5643663 | five period of Gastrodia elata | 53.200 | |
| SRR5643664 | five period of Gastrodia elata | 45.450 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 40.140 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 49.170 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 34.500 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 38.280 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 38.320 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 44.880 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 35.760 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 35.880 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 36.080 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 37.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 45.910 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 45.910 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 42.92 |
| Juven | Juvenile tuber | 65.71 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 86.43 | |
| Mother_Juven | Mother tuber of Juvenile | 98.33 |