Detail information of GWHGAAEX000062/evm.TU.scaffold_0.114
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|159897230|ref|YP_001543477.1| | 1.00E-15 | serine/threonine kinase [Herpetosiphon aurantiacus DSM 785] |
| KOG | KOG1187 | 2.00E-115 | Serine/threonine protein kinase |
| nr | gi|743793447|ref|XP_010923933.1| | 3.38E-130 | PREDICTED: serine/threonine-protein kinase CDL1-like [Elaeis guineensis] |
| Swissprot | tr|Q9FE20|PBS1_ARATH | 2.00E-113 | Serine/threonine-protein kinase PBS1 |
| trEMBL | tr|M0TMC1|M0TMC1_MUSAM | 7.00E-129 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P03680_001} |
| TAIR | AT3G20530 | 2.00E-115 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000014 | 7429839 | 7437455 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000062
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 700 | 955 | 5.40E-35 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.130 |
| SRR2545915 | Juvenile tuber | 0.090 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.300 |
| SRR5643514 | five period of Gastrodia elata | 0.190 | |
| SRR5643515 | five period of Gastrodia elata | 0.160 | |
| SRR5643524 | five period of Gastrodia elata | 0.270 | |
| SRR5643525 | five period of Gastrodia elata | 0.000 | |
| SRR5643528 | five period of Gastrodia elata | 0.130 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.230 | |
| SRR5643660 | five period of Gastrodia elata | 0.110 | |
| SRR5643661 | five period of Gastrodia elata | 0.020 | |
| SRR5643662 | five period of Gastrodia elata | 0.040 | |
| SRR5643663 | five period of Gastrodia elata | 0.070 | |
| SRR5643664 | five period of Gastrodia elata | 0.070 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.110 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.060 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.150 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.320 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.210 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.020 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.090 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.040 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.080 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.030 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.240 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.240 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.05 |
| Juven | Juvenile tuber | 0.16 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.14 | |
| Mother_Juven | Mother tuber of Juvenile | 0.13 |