Detail information of GWHGAAEX000067/evm.TU.scaffold_0.121
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 3.00E-16 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| nr | gi|28411832|dbj|BAC57307.1| | 4.26E-121 | serine/threonine kinase receptor precursor-like protein [Oryza sativa Japonica Group] |
| Swissprot | tr|Q8GYA4|CRK10_ARATH | 3.00E-101 | Cysteine-rich receptor-like protein kinase 10 (Precursor) |
| trEMBL | tr|W5C482|W5C482_WHEAT | 1.00E-122 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_2DS_37E29523D.1} |
| TAIR | AT4G23160_2 | 2.00E-103 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000014 | 7575488 | 7604101 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000067
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01657.16 | Stress-antifung | 27 | 119 | 6.20E-19 |
| PF01657.16 | Stress-antifung | 148 | 233 | 1.10E-09 |
| PF07714.16 | Pkinase_Tyr | 308 | 456 | 2.80E-28 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_DLSV |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.100 |
| SRR2545915 | Juvenile tuber | 3.430 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 3.060 |
| SRR5643514 | five period of Gastrodia elata | 1.630 | |
| SRR5643515 | five period of Gastrodia elata | 2.970 | |
| SRR5643524 | five period of Gastrodia elata | 2.230 | |
| SRR5643525 | five period of Gastrodia elata | 0.120 | |
| SRR5643528 | five period of Gastrodia elata | 0.040 | |
| SRR5643658 | five period of Gastrodia elata | 0.190 | |
| SRR5643659 | five period of Gastrodia elata | 1.170 | |
| SRR5643660 | five period of Gastrodia elata | 0.560 | |
| SRR5643661 | five period of Gastrodia elata | 1.520 | |
| SRR5643662 | five period of Gastrodia elata | 1.190 | |
| SRR5643663 | five period of Gastrodia elata | 1.110 | |
| SRR5643664 | five period of Gastrodia elata | 0.940 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.850 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.380 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.010 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.860 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.110 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.450 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.910 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.040 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.480 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.390 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.310 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.310 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.58 |
| Juven | Juvenile tuber | 0.53 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.07 | |
| Mother_Juven | Mother tuber of Juvenile | 0.86 |