Detail information of GWHGAAEX000068/evm.TU.scaffold_0.122
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|743890341|ref|XP_010911052.1| | 1.86E-31 | PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Elaeis guineensis] |
| Swissprot | tr|Q9LDQ3|CRK35_ARATH | 7.00E-29 | Putative cysteine-rich receptor-like protein kinase 35 (Precursor) |
| trEMBL | tr|M0UBE1|M0UBE1_MUSAM | 2.00E-31 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP22330_001} |
| TAIR | AT4G11460 | 5.00E-28 | cysteine-rich RLK (RECEPTOR-like protein kinase) 30 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000014 | 7604342 | 7604982 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000068
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 1 | 102 | 3.40E-10 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_DLSV |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.000 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.260 |
| SRR5643514 | five period of Gastrodia elata | 0.000 | |
| SRR5643515 | five period of Gastrodia elata | 0.000 | |
| SRR5643524 | five period of Gastrodia elata | 0.420 | |
| SRR5643525 | five period of Gastrodia elata | 0.000 | |
| SRR5643528 | five period of Gastrodia elata | 0.000 | |
| SRR5643658 | five period of Gastrodia elata | 0.000 | |
| SRR5643659 | five period of Gastrodia elata | 0.620 | |
| SRR5643660 | five period of Gastrodia elata | 0.230 | |
| SRR5643661 | five period of Gastrodia elata | 1.390 | |
| SRR5643662 | five period of Gastrodia elata | 0.470 | |
| SRR5643663 | five period of Gastrodia elata | 0.350 | |
| SRR5643664 | five period of Gastrodia elata | 0.210 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.270 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.460 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.230 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.510 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.300 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.450 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.410 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.190 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.190 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.00 |
| Juven | Juvenile tuber | 0.00 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.26 | |
| Mother_Juven | Mother tuber of Juvenile | 0.00 |