Gene detail

Detail information of GWHGAAEX000072/evm.TU.scaffold_0.133

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000014	8113976	8116271	-

Transcript Sequence
>GWHTAAEX000072 TTCAGCATTTTAAGAAAAGAAAACTGCATCAATTCATTAGAAATTAGGTTCAACTATTTAATTAAATCACCCAAGATTTATAAATGGTGAACCGTATCACCATTTAGAAAATCAAACAATTTTATTCAAACAAGTTATTTACTTACCTAATAATAAATATCATATATTAGTTACTTGAAGTTTCAGTCACAGCTATAAATCAAATATTTTTGCAATCTTTGAAGAGAAATTGATGAAAGTACAATGTTCTGATGAATGATAAGCATGAACATGGTTAAGAAGCATTGGACTCTAGTTGTTTATTTTTATTTTCATTCACTTCCTCTATAGTTTGATATGTCCATATGTGTATTTTTTTAAACAAATGAACTATATAGTATTAAGTGTCACAAGGTTGATGAGAATATAATTAGGAAATCATTGCAAGAAGACTAATAAGAAATTTAAGCAATCATCTAAGGGATGGCCAATGAGACATTGTTATAAGGTAGTCAGATGCATAATCAGAGTCCATAAACAATTCAATAACTTGACAAATCATAAAGTCTATAGAAAAATTGCATAATAAAAATGAAAACATCTAATAATCATGCTAAAAAGTTTCTGTTTTTATAATTAATCACGATTACTCAATAACAACAGCCATGTCAATATTAACAAAATTATATAACCAAACTTTTAGATTCAAGCATTAGTGACACCGATTATTAACTTAATGGGTAACAACTTATGCTTGTAAATCATCTTCCCTTTTGTCAACCCGATTCAGGGATGACTGCAATATGAATCATAGTATTTAAAATTCGCAAAGAATGAGGTATGATCGAATATGGCACGATCGATTCAATTATTTCTGATTACTCAATTATTTCAAAGATTGATGAGTACTCATAATAAGAGGATGATTTGTGTATCGACACACTTATATTACATATGCTGAAAGAAATGACATGACATTCCTTTAGATTACATTCTTCAAACTAGACTATAGTAAGGCAATAAATGCAAAACATAATTTATAAATGGTTTGATATAAAACCTACTGCATATAAATGATAAGCATCAATATGGCATTTATGCCAAACATAGTCCTCAGCTACTTATCAATCATTAAGAAACATTCAAATACATTAATTTTATATATACCTTAATAAGTATCTTATGCATTGAAATGGTAATACAATGTTTTTCATAGGTTAGCAATTATAAGAAAAATCTCTCTTATAAGGATATCTAGAAATGTTAAACAACAAGAATTATTGCTACCACATAAGGAAGCCATTTCTCTTTAATTGAATTAATTCTAATCTTACAGCCCATTGGATTGAAATATATTGTCTTTCTATAAAGTAAAAGAACTTAAATTATTAATGAGTTATGATTTAAGAGATCTATCAAGATAGTAGTATCCTCCTTAAAGTTCATTATACTCACTTAACTAAATCTTTAATGCATGCATTAATAACAATTGATGAAGTTTAGCTTAATGGACCGTGTCTTATTGACCCACTAATCTCTCTTTCTCCTTTAGATAAATCAAGTTCTATAAACTACTTTAAGATGCACAGAATAATTCTAGTTAGAAGTTCTAAAGTGATATGATAGCATAATCAAGCTCAATAAAGTCAGATTGTACCATAAAAATAGATAGAATAAATCGATAAACAGGAAAAACTGTAAGACTTAGAAAATCGATTATATGCAACTCAAAACTAGCTAGATGTAAAGCACTTGATAGATTTGCATAGTATGGAGAAAAGGCAAACAAACTTCAGACTGCTCTCCTACTAGTGTATAAAAAATAGTTATTTTTATAAGATAAACGAAAAGGAGAAATTCAAATATCTTTCAAACTCAATTAGGGAGATAACATTTATTCAAACCTTCAAGAAGGAAGAATCAAATTCTGGAATTCAACGGATTTCACAGATTGTAGATGAAGATGGTACCTTGTAAGGTTCTTGCCTTCAAGTTGCCGACAGAAGTTAGGGATTTAGGGCACTCTATTGAGGCTGATCCTCTAAGAAAGACTTGGCTTCGCACTCCCCTTTCAAATCCTATGCCGCTCCTCCCCTCCAAGGATGTCCAATCGCCCCTCCTCCAAAAACTTCAAAAGTTGGGGATACGAAGAAAGACAAGGCTGAAGAAGGCCAGCTGTAGGGAGTTCGTACGCCCATCTTCGCCTCCTCTGCAATTGTGCGAAAAGGTGAGAGGAGGCGTACTGAAGAAATGGGGATTTTTCAGAGGGTCGTTCGATCAATCCTCTTTTGATCTAGCGACTCTCTTCCTTCGATAA

Network for GWHGAAEX000072

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.000
SRP064423	SRR2545915	Juvenile tuber	0.000
SRP108465	SRR5643513	five period of Gastrodia elata	6.210
	SRR5643514	five period of Gastrodia elata	7.400
	SRR5643515	five period of Gastrodia elata	5.830
	SRR5643524	five period of Gastrodia elata	6.880
	SRR5643525	five period of Gastrodia elata	7.970
	SRR5643528	five period of Gastrodia elata	7.930
	SRR5643658	five period of Gastrodia elata	9.120
	SRR5643659	five period of Gastrodia elata	14.300
	SRR5643660	five period of Gastrodia elata	17.560
	SRR5643661	five period of Gastrodia elata	15.510
	SRR5643662	five period of Gastrodia elata	17.540
	SRR5643663	five period of Gastrodia elata	16.860
	SRR5643664	five period of Gastrodia elata	19.900
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.910
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.420
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.800
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.350
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.030
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.000
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.530
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.530
SRP279888	Gastro	Gastrodia elata tuber	19.97
	Juven	Juvenile tuber	24.94
	Mother_Gastro	Mother tuber of Gastrodia elata	6.20
	Mother_Juven	Mother tuber of Juvenile	28.78